RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF334Q9HCZ1 680 aaPredicted RBP11.28□□□□□ -0.6
CCDC9-203ENST00000596938 ZMYM5Q9UJ78 669 aa11.28□□□□□ -0.6
CCDC9-203ENST00000596938 GTF3C4Q9UKN8 822 aa11.28□□□□□ -0.6
CCDC9-203ENST00000596938 CDH9Q9ULB4 789 aa11.28□□□□□ -0.6
CCDC9-203ENST00000596938 TRAF3IP3Q9Y228 551 aa11.28□□□□□ -0.6
CCDC9-203ENST00000596938 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 MYBPHLA2RUH7 354 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 SOBPA7XYQ1 873 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 H0Y858 1186 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 HMGA1P17096 107 aaKnown RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 ACAT1P24752 427 aaKnown RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 LMO2P25791 158 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 CDC25CP30307 473 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 GNL1P36915 607 aaPredicted RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 VIPR2P41587 438 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 MAGEA11P43364 429 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 MLLT6P55198 1093 aaPredicted RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 RPL10AP62906 217 aaKnown RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 MAPRE1Q15691 268 aaKnown RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 TAF12Q16514 161 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 NFIL3Q16649 462 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 VITQ6UXI7 678 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 ARID3BQ8IVW6 561 aaPredicted RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 PJA1Q8NG27 643 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 PLEKHO2Q8TD55 490 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 GIPC2Q8TF65 315 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
CCDC9-203ENST00000596938 CEP295NLQ96MC4 621 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 MMS19Q96T76 1030 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 PI4K2AQ9BTU6 479 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 MKNK1Q9BUB5 465 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 TASP1Q9H6P5 420 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 DLGAP2Q9P1A6 1054 aa11.27□□□□□ -0.61
CCDC9-203ENST00000596938 NOTCH4Q99466 2003 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 HEPACAM2A8MVW5 462 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 IKBKBO14920 756 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF263O14978 683 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 MAPK13O15264 365 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 CALUO43852 315 aaPredicted RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 PHACTR2O75167 634 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 F11P03951 625 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 C4BPAP04003 597 aaKnown RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 NR3C1P04150 777 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 CSH1P0DML2 217 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 CSH2P0DML3 217 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 GLULP15104 373 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 CYP2F1P24903 491 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 MRE11P49959 708 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 CDR1P51861 262 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 MYL6P60660 151 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 FCHO2Q0JRZ9 810 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 TRPC3Q13507 836 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 GRM2Q14416 872 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 WDR72Q3MJ13 1102 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 GPR158Q5T848 1215 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 C4orf50Q6ZRC1 276 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 ALYREFQ86V81 257 aaKnown RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 SPATA2LQ8IUW3 424 aaPredicted RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 FMR1NBQ8N0W7 255 aaPredicted RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 GUF1Q8N442 669 aaKnown RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 ATOH1Q92858 354 aaPredicted RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 MYRFLQ96LU7 910 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 SLC46A2Q9BY10 475 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 SNX25Q9H3E2 840 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 OBP2AQ9NY56 170 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 MAGEC2Q9UBF1 373 aaPredicted RBP11.26□□□□□ -0.61
CCDC9-203ENST00000596938 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 PIEZO1Q92508 2521 aa11.26□□□□□ -0.61
CCDC9-203ENST00000596938 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 FAM170BA6NMN3 283 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 LRRIQ3A6PVS8 624 aaPredicted RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 PROB1E7EW31 1015 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 MAN2B1O00754 1011 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 CHADO15335 359 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 HCRTO43612 131 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 ATP2C2O75185 946 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 NOL4O94818 638 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 DCNP07585 359 aaKnown RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 PDGFRBP09619 1106 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 DDX6P26196 483 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 GDI1P31150 447 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 CASP4P49662 377 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 NLRP12P59046 1061 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 MCCD1P59942 119 aaPredicted RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 TNNC1P63316 161 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 ENPEPQ07075 957 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 DDR2Q16832 855 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 TDRD10Q5VZ19 366 aaKnown RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 VSTM1Q6UX27 236 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF852Q6ZMS4 543 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms