RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 CERS4Q9HA82 394 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 DPP7Q9UHL4 492 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 RNF225M0QZC1 329 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 C2CD2LO14523 706 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 FSCN2O14926 492 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 GFPT2O94808 682 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 DNAJB1P25685 340 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 OR1D2P34982 312 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 TERF1P54274 439 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 SLC8A3P57103 927 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ERVFC1P60507 584 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 CNGA2Q16280 664 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ASIC2Q16515 512 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF394Q53GI3 561 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ELMSAN1Q6PJG2 1045 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 PRSS55Q6UWB4 352 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 RTL10Q7L3V2 364 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ACOT1Q86TX2 421 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 OSTM1Q86WC4 334 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 FUBP3Q96I24 572 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 PANX2Q96RD6 677 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 HNRNPABQ99729 332 aaKnown RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 CLSTN3Q9BQT9 956 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ABCB6Q9NP58 842 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 AJAP1Q9UKB5 411 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 CDY1Q9Y6F8 540 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ATP8B3O60423 1300 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-214ENST00000592186 MFAP3LO75121 409 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 ABLIM3O94929 683 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 SERPING1P05155 500 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CNPP09543 421 aaKnown RBP11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CPB1P15086 417 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CD19P15391 556 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CYP11B1P15538 503 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 POU3F3P20264 500 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-214ENST00000592186 ACAT1P24752 427 aaKnown RBP11.34□□□□□ -0.59
SMAD4-214ENST00000592186 KLRC2P26717 231 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CA8P35219 290 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 PRKCIP41743 596 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 PDE6CP51160 858 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CDK17Q00537 523 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CAMK1Q14012 370 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 MEA1Q16626 185 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 ARHGAP17Q68EM7 881 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 VPS36Q86VN1 386 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 SPATA2LQ8IUW3 424 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-214ENST00000592186 OR10T2Q8NGX3 314 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 SPPL2BQ8TCT7 592 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF606Q8WXB4 792 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 KLHL5Q96PQ7 755 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 HESX1Q9UBX0 185 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 GTF3C4Q9UKN8 822 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 PCDHB5Q9Y5E4 795 aa11.34□□□□□ -0.59
SMAD4-214ENST00000592186 CHD9Q3L8U1 2897 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 SCN1AP35498 2009 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 MYBPHLA2RUH7 354 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 TEX28O15482 410 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 THAP12O43422 761 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ATP2C2O75185 946 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ATF2P15336 505 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ANXA13P27216 316 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 GNA15P30679 374 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ELF1P32519 619 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 MAGEA11P43364 429 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 TUFMP49411 452 aaKnown RBP11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ADKP55263 362 aaKnown RBP11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ARPP19P56211 112 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 CYP27A1Q02318 531 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ARID5AQ03989 594 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 CFAP221Q4G0U5 840 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 SLC39A12Q504Y0 691 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 MDH1BQ5I0G3 518 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 VSTM1Q6UX27 236 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 SPRED2Q7Z698 418 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 SLC47A2Q86VL8 602 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 C12orf29Q8N999 325 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 TC2NQ8N9U0 490 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ANKRD52Q8NB46 1076 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 SPC24Q8NBT2 197 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 HDAC7Q8WUI4 952 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 AUTS2Q8WXX7 1259 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 CEP295NLQ96MC4 621 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 TWNKQ96RR1 684 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 CDCA3Q99618 268 aaPredicted RBP11.33□□□□□ -0.6
SMAD4-214ENST00000592186 PKMYT1Q99640 499 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 UBXN6Q9BZV1 441 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms