RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 RHOBTB2Q9BYZ6 727 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 HSFX1Q9UBD0 423 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 INSL5Q9Y5Q6 135 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 CCL16O15467 120 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 ZNF165P49910 485 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 NDST1P52848 882 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 INCA1Q0VD86 236 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 CBX2Q14781 532 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 NFE2Q16621 373 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 CYP26C1Q6V0L0 522 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 UNC93AQ86WB7 457 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 CRYBG2Q8N1P7 616 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 AOPEPQ8N6M6 819 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 SPPL2BQ8TCT7 592 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 ARID3AQ99856 593 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 NDST4Q9H3R1 872 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 PCDHB5Q9Y5E4 795 aa12.75□□□□□ -0.37
RABGGTA-218ENST00000560777 GTPBP10A4D1E9 387 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 LRRC10BA6NIK2 292 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 CILPO75339 1184 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 SOAT2O75908 522 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 POU2F2P09086 479 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 HAPLN1P10915 354 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 ZNF18P17022 549 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 CD58P19256 250 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 SLC9A1P19634 815 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 CYP2F1P24903 491 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 MTHFRP42898 656 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 TUFMP49411 452 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 TWF1Q12792 350 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 CUL2Q13617 745 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 IQCB1Q15051 598 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 KRT31Q15323 416 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 MAPRE1Q15691 268 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 ACOT1Q86TX2 421 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 B3GALNT2Q8NCR0 500 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 MYCBPAPQ8TBZ2 947 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 RIPOR3Q96MK2 946 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 TWNKQ96RR1 684 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 INTS2Q9H0H0 1204 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 PIDD1Q9HB75 910 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 CISHQ9NSE2 258 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 ABI2Q9NYB9 513 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 CEP72Q9P209 647 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
RABGGTA-218ENST00000560777 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 XYLBO75191 536 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 LRG1P02750 347 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 PON1P27169 355 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 ALDH1A3P47895 512 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 ORC1Q13415 861 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 MGAT5BQ3V5L5 792 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 MDH1BQ5I0G3 518 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 TJAP1Q5JTD0 557 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 GBP6Q6ZN66 633 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 GRASPQ7Z6J2 395 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 KAT5Q92993 513 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 MYLPFQ96A32 169 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 FUBP3Q96I24 572 aaKnown RBP eCLIP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 TNIP3Q96KP6 325 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 NECTIN4Q96NY8 510 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 NT5C1BQ96P26 610 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 SEPT5Q99719 369 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 ELOVL4Q9GZR5 314 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 VPS16Q9H269 839 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 FAM124BQ9H5Z6 455 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 WDR6Q9NNW5 1121 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 YIPF1Q9Y548 306 aa12.73□□□□□ -0.37
RABGGTA-218ENST00000560777 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 PTPN2P17706 415 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 ATF6P18850 670 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 ACO1P21399 889 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 BDNFP23560 247 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms