RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 MED7O43513 233 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CAND2O75155 1236 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 SMPD1P17405 629 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 TMOD1P28289 359 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RAP1GAPP47736 663 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CCT5P48643 541 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 PTGISQ16647 500 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 WDR72Q3MJ13 1102 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 LRRC38Q5VT99 294 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 JADE1Q6IE81 842 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RHBDF2Q6PJF5 856 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 ANKS1BQ7Z6G8 1248 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CROCCP2Q86T23 111 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RCOR2Q8IZ40 523 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 PPP1R16BQ96T49 567 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 C16orf70Q9BSU1 422 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RABEP2Q9H5N1 569 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RRP15Q9Y3B9 282 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 DCDC2CA8MYV0 355 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 MEFVO15553 781 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 VTNP04004 478 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 PAEPP09466 180 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CYBAP13498 195 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 PRKAR2AP13861 404 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CD19P15391 556 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 IVDP26440 423 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 OGDHQ02218 1023 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 NFX1Q12986 1120 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 IRF5Q13568 498 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 PIGHQ14442 188 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 DENND1BQ6P3S1 775 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 TRMT10CQ7L0Y3 403 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 NIPA2Q8N8Q9 360 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 PGM2Q96G03 612 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 SLITRK1Q96PX8 696 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 LHX5Q9H2C1 402 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 ABHD16BQ9H3Z7 469 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 ASB7Q9H672 318 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 F8VP50 259 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 NDUFAB1O14561 156 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 KRT1P04264 644 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 ITGB3P05106 788 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 ATF2P15336 505 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 TCF4P15884 667 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 HOXD10P28358 340 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 RAD23BP54727 409 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 CAV1Q03135 178 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 ADCY2Q08462 1091 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 BYSLQ13895 437 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 KYAT1Q16773 422 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 CYP4A22Q5TCH4 519 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 MTHFD1LQ6UB35 978 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 CCDC25Q86WR0 208 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 CXorf38Q8TB03 319 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 SCLT1Q96NL6 688 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 TMEM109Q9BVC6 243 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 TSPYL1Q9H0U9 437 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 SDCBP2Q9H190 292 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 AAASQ9NRG9 546 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 KLHL11Q9NVR0 708 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 NEU2Q9Y3R4 380 aa15.28■□□□□ 0.04
RABGGTA-212ENST00000559974 H3BRB1 525 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 EBAG9O00559 213 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 INHAP05111 366 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 ATICP31939 592 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 ITGA8P53708 1063 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 CDH8P55286 799 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 TRIP13Q15645 432 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 PTPN20Q4JDL3 420 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 ATP13A4Q4VNC1 1196 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 ZFYVE27Q5T4F4 411 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 TRAIPQ9BWF2 469 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 TUT1Q9H6E5 874 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
RABGGTA-212ENST00000559974 PI4K2BG5E9Z4 385 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 ADCY8P40145 1251 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 COPS2P61201 443 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 SLC10A6Q3KNW5 377 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 C6orf118Q5T5N4 469 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 ZNF365Q70YC5 407 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 CCDC89Q8N998 374 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 NLRP7Q8WX94 980 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 FAM118BQ9BPY3 351 aa15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 CDC42EP4Q9H3Q1 356 aaKnown RBP15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.03
RABGGTA-212ENST00000559974 CILPO75339 1184 aa15.26■□□□□ 0.03
RABGGTA-212ENST00000559974 TJP3O95049 919 aa15.26■□□□□ 0.03
RABGGTA-212ENST00000559974 ATF7P17544 494 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-212ENST00000559974 GRK4P32298 578 aa15.26■□□□□ 0.03
RABGGTA-212ENST00000559974 PTPN7P35236 360 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms