RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 C2orf15Q8WU43 125 aaKnown RBP23.11■■□□□ 1.29
SNX1-206ENST00000559389 JAKMIP2Q96AA8 810 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 FAM81BQ96LP2 452 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 NT5C1AQ9BXI3 368 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 ELOVL4Q9GZR5 314 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 UBE2ZQ9H832 354 aaPredicted RBP23.11■■□□□ 1.29
SNX1-206ENST00000559389 PLCB1Q9NQ66 1216 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 DPP7Q9UHL4 492 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 AJAP1Q9UKB5 411 aaPredicted RBP23.11■■□□□ 1.29
SNX1-206ENST00000559389 GTF3C4Q9UKN8 822 aa23.11■■□□□ 1.29
SNX1-206ENST00000559389 SEC24AO95486 1093 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 C8AP07357 584 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 PTPN1P18031 435 aaKnown RBP23.1■■□□□ 1.29
SNX1-206ENST00000559389 KLK7P49862 253 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 ORC1Q13415 861 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 MDH1BQ5I0G3 518 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 ANKRD54Q6NXT1 300 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 ACOT1Q86TX2 421 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 GAS2L3Q86XJ1 694 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 TCEAL8Q8IYN2 117 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 CRYBG2Q8N1P7 616 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 TTC9BQ8N6N2 239 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 ATAD1Q8NBU5 361 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 SLC7A14Q8TBB6 771 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 MYCBPAPQ8TBZ2 947 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 SPPL2BQ8TCT7 592 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 MYLPFQ96A32 169 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
SNX1-206ENST00000559389 GANQ9H2C0 597 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 CRISPLD1Q9H336 500 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 SFXN1Q9H9B4 322 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 ABCB6Q9NP58 842 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 UBE2TQ9NPD8 197 aaPredicted RBP23.1■■□□□ 1.29
SNX1-206ENST00000559389 ABI2Q9NYB9 513 aaPredicted RBP23.1■■□□□ 1.29
SNX1-206ENST00000559389 HSFX1Q9UBD0 423 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 PTPRDP23468 1912 aa23.1■■□□□ 1.29
SNX1-206ENST00000559389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.09■■□□□ 1.29
SNX1-206ENST00000559389 TEX33O43247 280 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 ZMYND10O75800 440 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 PAPLNO95428 1278 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 RFX1P22670 979 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 RAD23BP54727 409 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 KLHDC7AQ5VTJ3 777 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 CCDC149Q6ZUS6 474 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 PCED1BQ96HM7 432 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 MSLNLQ96KJ4 702 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 RBSNQ9H1K0 784 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 CYP4F11Q9HBI6 524 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 ZDHHC7Q9NXF8 308 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 YIPF1Q9Y548 306 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 PCDHB5Q9Y5E4 795 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 INSL5Q9Y5Q6 135 aa23.09■■□□□ 1.29
SNX1-206ENST00000559389 PRRG1O14668 218 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 HOXB8P17481 243 aaPredicted RBP23.08■■□□□ 1.29
SNX1-206ENST00000559389 HOXA9P31269 272 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 ELF1P32519 619 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 MFAP3P55082 362 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 CFAP221Q4G0U5 840 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 ZNF394Q53GI3 561 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 IQCEQ6IPM2 695 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 SYCE2Q6PIF2 218 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 C4orf50Q6ZRC1 276 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 EP400NLQ6ZTU2 488 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 RTL10Q7L3V2 364 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 FUBP3Q96I24 572 aaKnown RBP eCLIP23.08■■□□□ 1.29
SNX1-206ENST00000559389 LPIN3Q9BQK8 851 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 DNAJC12Q9UKB3 198 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 CNTN6Q9UQ52 1028 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 FHOD1Q9Y613 1164 aa23.08■■□□□ 1.29
SNX1-206ENST00000559389 UCHL3P15374 230 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 TRIM21P19474 475 aaKnown RBP23.07■■□□□ 1.28
SNX1-206ENST00000559389 CDR1P51861 262 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 ZNF132P52740 706 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 DUSP4Q13115 394 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 UVSSAQ2YD98 709 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 SMYD5Q6GMV2 418 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 SPATA2LQ8IUW3 424 aaPredicted RBP23.07■■□□□ 1.28
SNX1-206ENST00000559389 SLC4A11Q8NBS3 891 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 CMASQ8NFW8 434 aaPredicted RBP23.07■■□□□ 1.28
SNX1-206ENST00000559389 SHC3Q92529 594 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 HLA-CQ95604 372 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 TMEM176AQ96HP8 235 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 DNAI2Q9GZS0 605 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 FAM207AQ9NSI2 230 aaPredicted RBP23.07■■□□□ 1.28
SNX1-206ENST00000559389 COG5Q9UP83 839 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 DAAM1Q9Y4D1 1078 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 PCDHB4Q9Y5E5 795 aa23.07■■□□□ 1.28
SNX1-206ENST00000559389 A0A1W2PQC6 194 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 SPDYE4A6NLX3 237 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 EPHB6O15197 1021 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 RFPL2O75678 378 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 NOL4O94818 638 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 HNRNPA1P09651 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
SNX1-206ENST00000559389 HAPLN1P10915 354 aaPredicted RBP23.06■■□□□ 1.28
SNX1-206ENST00000559389 KCNA5P22460 613 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 UBASH3AP57075 661 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 CYP27A1Q02318 531 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 NR1I3Q14994 352 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 PPM1LQ5SGD2 360 aa23.06■■□□□ 1.28
SNX1-206ENST00000559389 TMEM270Q6UE05 265 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms