RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 C2orf16Q68DN1 1984 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 THADAQ6YHU6 1953 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ESPL1Q14674 2120 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 LOC102724159A0A0B4J2E5 919 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 SSU72P8A0A1W2PR75 194 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 RNF212BA8MTL3 300 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 HAS3O00219 553 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 GRID2O43424 1007 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 RFPL2O75678 378 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 GJB3O75712 270 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 PDE8BO95263 885 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 APBB3O95704 486 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 CHRNA1P02708 482 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 PRKCGP05129 697 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 IGKV5-2P06315 115 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 GNLYP22749 145 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 AFF3P51826 1226 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 DGKEP52429 567 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ERVPABLB-1P60509 514 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 RPS26P62854 115 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 GSTO1P78417 241 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 LPIN1Q14693 890 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 SEPT2Q15019 361 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 PWP2Q15269 919 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 SLC14A2Q15849 920 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 CLEC16AQ2KHT3 1053 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 KIAA1755Q5JYT7 1200 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 SPDYCQ5MJ68 293 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 PRAMEF13Q5VWM6 474 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 PCNX4Q63HM2 1172 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 SP5Q6BEB4 398 aaPredicted RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 CAPRIN2Q6IMN6 1127 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 GDF7Q7Z4P5 450 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 NAGSQ8N159 534 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 MORC4Q8TE76 937 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 AUTS2Q8WXX7 1259 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 CENPTQ96BT3 561 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 NOL10Q9BSC4 688 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 NT5C3AQ9H0P0 336 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ADNPQ9H2P0 1102 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 C8orf33Q9H7E9 229 aaPredicted RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 VCPKMTQ9H867 229 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 CAPN10Q9HC96 672 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF334Q9HCZ1 680 aaPredicted RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 LUC7LQ9NQ29 371 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 CRTAC1Q9NQ79 661 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 FSCN3Q9NQT6 498 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ZDHHC7Q9NXF8 308 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 FAM8A1Q9UBU6 413 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ADD3Q9UEY8 706 aaKnown RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ABCF2Q9UG63 623 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 GPR160Q9UJ42 338 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 ADAM30Q9UKF2 790 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 PILRBQ9UKJ0 227 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 INVSQ9Y283 1065 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 TMX2Q9Y320 296 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 MAP1AP78559 2803 aaPredicted RBP2.57□□□□□ -2
TRAV1-1-201ENST00000542354 MEGF8Q7Z7M0 2845 aa2.57□□□□□ -2
TRAV1-1-201ENST00000542354 MYH2Q9UKX2 1941 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 LRRK1Q38SD2 2015 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MGAM2Q2M2H8 2515 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ESYT2A0FGR8 921 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 CARNS1A5YM72 827 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MPHOSPH10O00566 681 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ENC1O14682 589 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 GPR182O15218 404 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 FLRT2O43155 660 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MTSS1O43312 755 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PSPNO60542 156 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 GJB6O95452 261 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 BAG3O95817 575 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 GLUD1P00367 558 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 F2P00734 622 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 GH1P01241 217 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 LRG1P02750 347 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ESR1P03372 595 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 CNPP09543 421 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 CAPN3P20807 821 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 BMP6P22004 513 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 NTF4P34130 210 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 SARSP49591 514 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 KPNA1P52294 538 aaPredicted RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PPP2R2AP63151 447 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ATP8B2P98198 1209 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 TNK2Q07912 1038 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MYO1EQ12965 1108 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 SLBPQ14493 270 aaKnown RBP eCLIP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 KIZQ2M2Z5 673 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 USH1GQ495M9 461 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 RALGPS1Q5JS13 557 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 METTL24Q5JXM2 366 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 WIPI1Q5MNZ9 446 aaPredicted RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 FAM102BQ5T8I3 360 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 LYSMD4Q5XG99 296 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 EGFLAMQ63HQ2 1017 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 LMBRD2Q68DH5 695 aaPredicted RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 NXPE4Q6UWF7 544 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 RNF111Q6ZNA4 994 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms