RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
ATP2C1-224ENST00000533801 SPOCD1Q6ZMY3 1216 aa16.79■□□□□ 0.28
ATP2C1-224ENST00000533801 JPH2Q9BR39 696 aaPredicted RBP16.79■□□□□ 0.28
ATP2C1-224ENST00000533801 MAK16Q9BXY0 300 aaKnown RBP16.79■□□□□ 0.28
ATP2C1-224ENST00000533801 TMEM191CA6NGB0 347 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 TULP2O00295 520 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 RNF8O76064 485 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 NPNTQ6UXI9 565 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 FAM47EQ6ZV65 393 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 MAIP1Q8WWC4 291 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 PIWIL1Q96J94 861 aaKnown RBP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 ACAP3Q96P50 834 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 ELOVL4Q9GZR5 314 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 C22orf31O95567 290 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 ERBB2P04626 1255 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 BBS9Q3SYG4 887 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 PHF13Q86YI8 300 aaPredicted RBP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 ACTL9Q8TC94 416 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 SLITRK1Q96PX8 696 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 KLF6Q99612 283 aaPredicted RBP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 EXOC1LA0A1B0GW35 172 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 VGLL3A8MV65 326 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 PIGRP01833 764 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 OTUD4Q01804 1114 aaKnown RBP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 PTPN11Q06124 597 aaPredicted RBP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 CCDC62Q6P9F0 684 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 CACNA2D3Q8IZS8 1091 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 RNF169Q8NCN4 708 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 XPO6Q96QU8 1125 aaKnown RBP16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 MROH8Q9H579 483 aa16.78■□□□□ 0.28
ATP2C1-224ENST00000533801 GOLGA8RI6L899 631 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 MICAL2O94851 1124 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 IL1R2P27930 398 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 ARHGAP1Q07960 439 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 PDIA2Q13087 525 aaKnown RBP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 RBM41Q96IZ5 413 aaKnown RBP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 XYLT2Q9H1B5 865 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 GOLGA2P5Q9HBQ8 144 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 NEU2Q9Y3R4 380 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 TMEM120BA0PK00 339 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 WDR91A4D1P6 747 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 PSTPIP1O43586 416 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 BRAFP15056 766 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 CDH6P55285 790 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 CLDN10P78369 228 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 ZNF200P98182 395 aaPredicted RBP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 BEX3Q00994 111 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 AUHQ13825 339 aaKnown RBP16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 AGBL2Q5U5Z8 902 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 PLPPR4Q7Z2D5 763 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 SCUBE3Q8IX30 993 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 SEC14L1Q92503 715 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 AAASQ9NRG9 546 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 DPP3Q9NY33 737 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 NINJ2Q9NZG7 142 aa16.77■□□□□ 0.28
ATP2C1-224ENST00000533801 ZNFX1Q9P2E3 1918 aaKnown RBP16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 H7C0C1 242 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 PECAM1P16284 738 aaPredicted RBP16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 ITIH2P19823 946 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 ATP5OP48047 213 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 GRIK4Q16099 956 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 SLC10A6Q3KNW5 377 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 FAM133BQ5BKY9 247 aaKnown RBP16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 GKAP1Q5VSY0 366 aaPredicted RBP16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 TSHZ1Q6ZSZ6 1077 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 LRRC34Q8IZ02 419 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 B3GNT5Q9BYG0 378 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 KIF9Q9HAQ2 790 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 CDHR5Q9HBB8 845 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 PNMA3Q9UL41 463 aa16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 MRPL42Q9Y6G3 142 aaKnown RBP16.77■□□□□ 0.27
ATP2C1-224ENST00000533801 E5RJQ4 531 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 FAM107AO95990 144 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 PDGFRAP16234 1089 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 CYP2B6P20813 491 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 HADHQ16836 314 aaKnown RBP16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 CCDC125Q86Z20 511 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 EXD1Q8NHP7 514 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 RUNDC3BQ96NL0 473 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 RLFQ13129 1914 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 RPS6KA5O75582 802 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 RABGGTBP53611 331 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 RAD23BP54727 409 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 YWHAEP62258 255 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms