RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 ZNF568Q3ZCX4 644 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 RABEPKQ7Z6M1 372 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 USP37Q86T82 979 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 TRIM22Q8IYM9 498 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 FAM177A1Q8N128 213 aaPredicted RBP15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 PIP4K2CQ8TBX8 421 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 OSCP1Q8WVF1 389 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 ACAP3Q96P50 834 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 PRORYQ9H606 182 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 TUBGCP4Q9UGJ1 667 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 PCDHA12Q9UN75 941 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 HELZP42694 1942 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 DEXIO95424 95 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 F11P03951 625 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 SYPP08247 313 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 DDX6P26196 483 aaKnown RBP eCLIP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 HSPA4P34932 840 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 TUFMP49411 452 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 NLRP12P59046 1061 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 MTF1Q14872 753 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 PPP2R5AQ15172 486 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 EML3Q32P44 896 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 TXNDC8Q6A555 127 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 MARCH9Q86YJ5 346 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 ATP2A3Q93084 1043 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 SEPT5Q99719 369 aaPredicted RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 NAP1L4Q99733 375 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 ACO2Q99798 780 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 AGXT2Q9BYV1 514 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 DUS2Q9NX74 493 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 KCNJ14Q9UNX9 436 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 WNT6Q9Y6F9 365 aa15.09■□□□□ 0.01
NKX3-1-202ENST00000523261 ARHGAP6O43182 974 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 AP5Z1O43299 807 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 SPATA31C1P0DKV0 1188 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
NKX3-1-202ENST00000523261 PDIA3P30101 505 aaKnown RBP15.08■□□□□ 0
NKX3-1-202ENST00000523261 OPRD1P41143 372 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 IFNAR2P48551 515 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 MRPS21P82921 87 aaKnown RBP15.08■□□□□ 0
NKX3-1-202ENST00000523261 CAMK2BQ13554 666 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 BYSLQ13895 437 aaKnown RBP15.08■□□□□ 0
NKX3-1-202ENST00000523261 TAF12Q16514 161 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 PIK3AP1Q6ZUJ8 805 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 MON1AQ86VX9 555 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 FBXL16Q8N461 479 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 DEFB119Q8N690 84 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 GIPC2Q8TF65 315 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
NKX3-1-202ENST00000523261 PTPN13Q12923 2485 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 K7ERI5 159 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 SGK1O00141 431 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 ABLIM1O14639 778 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 DKK1O94907 266 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 CYP11B2P19099 503 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 TYMPP19971 482 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 ITPKBP27987 946 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 RPL6Q02878 288 aaKnown RBP15.07■□□□□ 0
NKX3-1-202ENST00000523261 ZNF33AQ06730 810 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 ZNF77Q15935 545 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 SLC10A6Q3KNW5 377 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 MGAT5BQ3V5L5 792 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
NKX3-1-202ENST00000523261 ARMCX5Q6P1M9 558 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 PADI6Q6TGC4 694 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 ALLCQ8N6M5 410 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 IL17RCQ8NAC3 791 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 TXNDC5Q8NBS9 432 aaKnown RBP15.07■□□□□ 0
NKX3-1-202ENST00000523261 HMGB4Q8WW32 186 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 TTC12Q9H892 705 aaPredicted RBP15.07■□□□□ 0
NKX3-1-202ENST00000523261 POLD4Q9HCU8 107 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 BCCIPQ9P287 314 aaKnown RBP eCLIP15.07■□□□□ 0
NKX3-1-202ENST00000523261 PCOLCE2Q9UKZ9 415 aa15.07■□□□□ 0
NKX3-1-202ENST00000523261 A0A1W2PQD8 194 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 KLF8O95600 359 aaPredicted RBP15.06■□□□□ 0
NKX3-1-202ENST00000523261 MCF2P10911 925 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 HMGA1P17096 107 aaKnown RBP15.06■□□□□ 0
NKX3-1-202ENST00000523261 LRPAP1P30533 357 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 CDR1P51861 262 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 FAM160A1Q05DH4 1040 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 USP4Q13107 963 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 NR1H3Q13133 447 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 GAB4Q2WGN9 574 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 EFCAB13Q8IY85 973 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 OR10T2Q8NGX3 314 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 IFT74Q96LB3 600 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 TOR4AQ9NXH8 423 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 COL6A6A6NMZ7 2263 aa15.06■□□□□ 0
NKX3-1-202ENST00000523261 FAM205CA6NFA0 338 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 PROZP22891 400 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 EVCP57679 992 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 DMP1Q13316 513 aaPredicted RBP15.05■□□□□ -0
NKX3-1-202ENST00000523261 SLC39A12Q504Y0 691 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 DSTYKQ6XUX3 929 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 CATSPER3Q86XQ3 398 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 SLC41A1Q8IVJ1 513 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms