RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 RCOR2Q8IZ40 523 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 C18orf25Q96B23 403 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-214ENST00000522165 ARL8AQ96BM9 186 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 NT5C1AQ9BXI3 368 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 GOLGA6AQ9NYA3 693 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 SCN1AP35498 2009 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 MYADML2A6NDP7 307 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 KRT14P02533 472 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 RFC1P35251 1148 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-214ENST00000522165 PLTPP55058 493 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 DHX9Q08211 1270 aaKnown RBP27.33■■□□□ 1.97
COL13A1-214ENST00000522165 ZNF268Q14587 947 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-214ENST00000522165 ATP13A4Q4VNC1 1196 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 TTMPQ5BVD1 217 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 LRIG3Q6UXM1 1119 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 ANKS1BQ7Z6G8 1248 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 LRRC52Q8N7C0 313 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 ATG4AQ8WYN0 398 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 TXLNGYQ9BZA5 131 aa27.33■■□□□ 1.97
COL13A1-214ENST00000522165 PPFIA2O75334 1257 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 AKAP5P24588 427 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 GABRB2P47870 512 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 TM4SF4P48230 202 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 PDCLQ13371 301 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 SNX1Q13596 522 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 GLRA4Q5JXX5 417 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 UBXN11Q5T124 520 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 APOL6Q9BWW8 343 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 SYNCQ9H7C4 482 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 R3HDM2Q9Y2K5 976 aaKnown RBP27.32■■□□□ 1.96
COL13A1-214ENST00000522165 CA12O43570 354 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 C6orf222P0C671 652 aaPredicted RBP27.32■■□□□ 1.96
COL13A1-214ENST00000522165 CYP3A5P20815 502 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 NFX1Q12986 1120 aaKnown RBP27.32■■□□□ 1.96
COL13A1-214ENST00000522165 LCLAT1Q6UWP7 414 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 JOSD2Q8TAC2 188 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 FBXO25Q8TCJ0 367 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 FNIP1Q8TF40 1166 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 RNF25Q96BH1 459 aaPredicted RBP27.32■■□□□ 1.96
COL13A1-214ENST00000522165 RBM41Q96IZ5 413 aaKnown RBP27.32■■□□□ 1.96
COL13A1-214ENST00000522165 ZIC5Q96T25 663 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 HOMER3Q9NSC5 361 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 PARP2Q9UGN5 583 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 SNX9Q9Y5X1 595 aa27.32■■□□□ 1.96
COL13A1-214ENST00000522165 H0YGN5 161 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 CETN2P41208 172 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 SLITRK1Q96PX8 696 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 MRPL45Q9BRJ2 306 aaKnown RBP27.31■■□□□ 1.96
COL13A1-214ENST00000522165 KLHL11Q9NVR0 708 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 UBQLN1Q9UMX0 589 aaKnown RBP27.31■■□□□ 1.96
COL13A1-214ENST00000522165 NFS1Q9Y697 457 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 KPNA6O60684 536 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 CYBAP13498 195 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 PPP1R7Q15435 360 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 C9orf57Q5W0N0 161 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 DPH6Q7L8W6 267 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 FAM76AQ8TAV0 307 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 UBA3Q8TBC4 463 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 UBLCP1Q8WVY7 318 aaPredicted RBP27.31■■□□□ 1.96
COL13A1-214ENST00000522165 MCRS1Q96EZ8 462 aa27.31■■□□□ 1.96
COL13A1-214ENST00000522165 KRT1P04264 644 aa27.3■■□□□ 1.96
COL13A1-214ENST00000522165 PSMA2P25787 234 aa27.3■■□□□ 1.96
COL13A1-214ENST00000522165 GJA9P57773 515 aa27.3■■□□□ 1.96
COL13A1-214ENST00000522165 CCNG2Q16589 344 aa27.3■■□□□ 1.96
COL13A1-214ENST00000522165 RNF19AQ9NV58 838 aa27.3■■□□□ 1.96
COL13A1-214ENST00000522165 PDCD11Q14690 1871 aaKnown RBP27.3■■□□□ 1.96
COL13A1-214ENST00000522165 PI4K2BG5E9Z4 385 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 LMAN1P49257 510 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 KRT17Q04695 432 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 XKR4Q5GH76 650 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 SPDYCQ5MJ68 293 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 TXNRD3NBQ6F5E7 133 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 SYDE1Q6ZW31 735 aaPredicted RBP27.29■■□□□ 1.96
COL13A1-214ENST00000522165 GRK7Q8WTQ7 553 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 ARHGAP39Q9C0H5 1083 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 METTL5Q9NRN9 209 aaKnown RBP27.29■■□□□ 1.96
COL13A1-214ENST00000522165 TSPAN16Q9UKR8 245 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 SMIM28A0A1B0GU29 152 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 FCGRTP55899 365 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 STILQ15468 1287 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 GNASQ5JWF2 1037 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 TAF2Q6P1X5 1199 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 MFSD7Q6UXD7 560 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 ATL2Q8NHH9 583 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 MTG1Q9BT17 334 aaPredicted RBP27.29■■□□□ 1.96
COL13A1-214ENST00000522165 RNF39Q9H2S5 420 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 DDX56Q9NY93 547 aaKnown RBP27.29■■□□□ 1.96
COL13A1-214ENST00000522165 FEZ2Q9UHY8 353 aaPredicted RBP27.29■■□□□ 1.96
COL13A1-214ENST00000522165 PCNTO95613 3336 aa27.29■■□□□ 1.96
COL13A1-214ENST00000522165 KCNE1P15382 129 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 PSMC4P43686 418 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 COPS2P61201 443 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 ZFYVE27Q5T4F4 411 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 C12orf29Q8N999 325 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 TRIB2Q92519 343 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 ART4Q93070 314 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 TSPAN18Q96SJ8 248 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 FAM129AQ9BZQ8 928 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 KLK14Q9P0G3 267 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 ATP8A1Q9Y2Q0 1164 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms