RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 CCNIQ14094 377 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
SPIDR-217ENST00000522117 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 IYDQ6PHW0 289 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 RAVER1Q8IY67 606 aaKnown RBP12.62□□□□□ -0.39
SPIDR-217ENST00000522117 PROM2Q8N271 834 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 CHCHD4Q8N4Q1 142 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-217ENST00000522117 BORCS5Q969J3 196 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 OXNAD1Q96HP4 312 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-217ENST00000522117 NCKIPSDQ9NZQ3 722 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-217ENST00000522117 ROBO1Q9Y6N7 1651 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 RTL9Q8NET4 1388 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
SPIDR-217ENST00000522117 MYMKA6NI61 221 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 PFDN6O15212 129 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 FOXD2O60548 495 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TOM1O60784 492 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ZBTB11O95625 1053 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ENO1P06733 434 aaKnown RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 GYS1P13807 737 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SLC9A1P19634 815 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 IVDP26440 423 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ARL4CP56559 192 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 PDE1CQ14123 709 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SF3B4Q15427 424 aaKnown RBP eCLIP12.61□□□□□ -0.395e-7■■□□□ 13.2
SPIDR-217ENST00000522117 FOXR2Q6PJQ5 311 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TTC39CQ8N584 583 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 VGLL2Q8N8G2 317 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SCFD1Q8WVM8 642 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ARHGEF26Q96DR7 871 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TSG101Q99816 390 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 PADI4Q9UM07 663 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 A0A1B0GTW7 788 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 NOTOA8MTQ0 251 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SULT1C4O75897 302 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 UCHL3P15374 230 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 PDE6AP16499 860 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 AMPD3Q01432 767 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 NDUFA5Q16718 116 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 LPCAT2Q7L5N7 544 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 AMIGO2Q86SJ2 522 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SLC30A5Q8TAD4 765 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SPATA17Q96L03 361 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 RBM15Q96T37 977 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 KLHL3Q9UH77 587 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 VPS51Q9UID3 782 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TLL2Q9Y6L7 1015 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TNKSO95271 1327 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TBKBP1A7MCY6 615 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 PIK3CDO00329 1044 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 CRTAMO95727 393 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 GGPS1O95749 300 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 DLDP09622 509 aaKnown RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 TMEM253P0C7T8 217 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ITIH2P19823 946 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ALDH3B2P48448 385 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ITGA8P53708 1063 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ATP1A4Q13733 1029 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SEPT6Q14141 434 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 GPR162Q16538 588 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ZNF829Q3KNS6 432 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ITPRIPL1Q6GPH6 555 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ALYREFQ86V81 257 aaKnown RBP12.61□□□□□ -0.39
SPIDR-217ENST00000522117 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 SGF29Q96ES7 293 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 CCDC77Q9BR77 488 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 ZFYVE28Q9HCC9 887 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 MRGBPQ9NV56 204 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 GID8Q9NWU2 228 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 COG5Q9UP83 839 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 INPP5FQ9Y2H2 1132 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 DTNAQ9Y4J8 743 aa12.61□□□□□ -0.39
SPIDR-217ENST00000522117 MYH11P35749 1972 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-217ENST00000522117 WDR91A4D1P6 747 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 TRAF5O00463 557 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 APOEP02649 317 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 HSPA1AP0DMV8 641 aaKnown RBP12.6□□□□□ -0.39
SPIDR-217ENST00000522117 HSPA1BP0DMV9 641 aaKnown RBP12.6□□□□□ -0.39
SPIDR-217ENST00000522117 GRAMD1BQ3KR37 738 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 DNAL1Q4LDG9 190 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 EFHC1Q5JVL4 640 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 SIX5Q8N196 739 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 DCUN1D1Q96GG9 259 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 EGLN2Q96KS0 407 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 UNKQ9C0B0 810 aaKnown RBP12.6□□□□□ -0.39
SPIDR-217ENST00000522117 IGSF9Q9P2J2 1179 aa12.6□□□□□ -0.39
SPIDR-217ENST00000522117 EMSYQ7Z589 1322 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms