RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SECISBP2LQ93073 1101 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 PCIF1Q9H4Z3 704 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 MAGEF1Q9HAY2 307 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 PDE11AQ9HCR9 933 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 DDX43Q9NXZ2 648 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 TCHHQ07283 1943 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 TICRRQ7Z2Z1 1910 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 PRPF40AO75400 957 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 KRT19P08727 400 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 CYP4F8P98187 520 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 INTS6LQ5JSJ4 861 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 DGKKQ5KSL6 1271 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 CMTM8Q8IZV2 173 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 GPR161Q8N6U8 529 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 NOC3LQ8WTT2 800 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 LRRC3BQ96PB8 259 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 SLC46A2Q9BY10 475 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 EPC1Q9H2F5 836 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 INTS13Q9NVM9 706 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 TFIP11Q9UBB9 837 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 UXTQ9UBK9 157 aaPredicted RBP21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 SNX9Q9Y5X1 595 aa21.45■■□□□ 1.02
UBE2D3-220ENST00000505307 SLC38A8A6NNN8 435 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 SPECC1L-ADORA2AF8WAN1 911 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 TNNC2P02585 160 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 HMGA1P17096 107 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 CTHP32929 405 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 AVPR1AP37288 418 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 NLRP12P59046 1061 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 SNRPFP62306 86 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 ASIC1P78348 528 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 DUOXA2Q1HG44 320 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 SPEM1Q8N4L4 309 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 FUBP3Q96I24 572 aaKnown RBP eCLIP21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 PI4K2AQ9BTU6 479 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 MTMR12Q9C0I1 747 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 KIF9Q9HAQ2 790 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 TMLHEQ9NVH6 421 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 SIX4Q9UIU6 781 aa21.44■■□□□ 1.02
UBE2D3-220ENST00000505307 NUP210Q8TEM1 1887 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 GABRDO14764 452 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 PRAMEF12O95522 483 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 F11P03951 625 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 TDGF1P13385 188 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 CXCL12P48061 93 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 CFAP221Q4G0U5 840 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 ATL3Q6DD88 541 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 TSSK4Q6SA08 328 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 GPIHBP1Q8IV16 184 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 KIAA2013Q8IYS2 634 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 ADGRF2Q8IZF7 708 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 SYNPOQ8N3V7 929 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 ZNF507Q8TCN5 953 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 MRPS31Q92665 395 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 DHX58Q96C10 678 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 C7orf25Q9BPX7 421 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 HSPBP1Q9NZL4 362 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 NCDNQ9UBB6 729 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 WDR87Q6ZQQ6 2873 aa21.43■■□□□ 1.02
UBE2D3-220ENST00000505307 UBE4BO95155 1302 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 ITPRIPL2Q3MIP1 535 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 FAM26FQ5R3K3 315 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 EPM2AIP1Q7L775 607 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 TMEM150AQ86TG1 271 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 WDR49Q8IV35 697 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 TRMT2BQ96GJ1 504 aaKnown RBP21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 HPDLQ96IR7 371 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 MYRFLQ96LU7 910 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 PKMYT1Q99640 499 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 GTSE1Q9NYZ3 720 aa21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 SMG5Q9UPR3 1016 aaKnown RBP21.42■■□□□ 1.02
UBE2D3-220ENST00000505307 NOL4O94818 638 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 PAPSS2O95340 614 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 CDR1P51861 262 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 ZNF268Q14587 947 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 MAPRE1Q15691 268 aaKnown RBP21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 SOWAHAQ2M3V2 549 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 SHC4Q6S5L8 630 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 C4orf50Q6ZRC1 276 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 LIMS2Q7Z4I7 341 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 MON1AQ86VX9 555 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 CBWD2Q8IUF1 395 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 SPATA2LQ8IUW3 424 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 MAB21L3Q8N8X9 362 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 ZFYVE19Q96K21 471 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 CEP295NLQ96MC4 621 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 TDP1Q9NUW8 608 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 CGNQ9P2M7 1197 aaKnown RBP21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 GTF3C4Q9UKN8 822 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 GPR179Q6PRD1 2367 aa21.41■■□□□ 1.02
UBE2D3-220ENST00000505307 HSP90AA1P07900 732 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 ZSCAN22P10073 491 aaPredicted RBP21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 ACAT1P24752 427 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 CYP2F1P24903 491 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 HOXD13P35453 343 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 MAGEA11P43364 429 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 SOX9P48436 509 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 AMPD2Q01433 879 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 UNC13DQ70J99 1090 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 HS2ST1Q7LGA3 356 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms