RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 FAM193AP78312 1265 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 MGAT3Q09327 533 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 INCA1Q0VD86 236 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PDCLQ13371 301 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 SNX1Q13596 522 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 TAF5Q15542 800 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 FBXO47Q5MNV8 452 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ZFYVE27Q5T4F4 411 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 MAP3K21Q5TCX8 1036 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 TTC30AQ86WT1 665 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 CCDC50Q8IVM0 306 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 GSTCDQ8NEC7 633 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ZNF296Q8WUU4 475 aaPredicted RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 KBTBD7Q8WVZ9 684 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 C1orf54Q8WWF1 131 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 RNF25Q96BH1 459 aaPredicted RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 DDX27Q96GQ7 796 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 NEUROG2Q9H2A3 272 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 CYP3A43Q9HB55 503 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 METTL5Q9NRN9 209 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 TIMM13Q9Y5L4 95 aaPredicted RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 CCDC66A2RUB6 948 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 CASTOR2A6NHX0 329 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 A8MXQ7 604 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 KPNA7A9QM74 516 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 E5RJQ4 531 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 PIRO00625 290 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 POMCP01189 267 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 CALB1P05937 261 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 PFKMP08237 780 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 CTNNA2P26232 953 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 CDH5P33151 784 aaPredicted RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 POU5F1Q01860 360 aaKnown RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 ADCY2Q08462 1091 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 LPIN1Q14693 890 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 SMTNL2Q2TAL5 461 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 FAM182AQ5T1J6 154 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 SH3PXD2AQ5TCZ1 1133 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 RSPH3Q86UC2 560 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 OSTM1Q86WC4 334 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 XYLT1Q86Y38 959 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 SLC13A5Q86YT5 568 aaPredicted RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 ZNF784Q8NCA9 323 aaPredicted RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 AENQ8WTP8 325 aaKnown RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 VCPIP1Q96JH7 1222 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 MRPL47Q9HD33 250 aaKnown RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 OGFRQ9NZT2 677 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 INPP5FQ9Y2H2 1132 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 R3HDM2Q9Y2K5 976 aaKnown RBP6.59□□□□□ -1.36
CLK1-210ENST00000473565 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 SCINQ9Y6U3 715 aa6.59□□□□□ -1.36
CLK1-210ENST00000473565 A0A0U1RQG5 324 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 H3BQF6 201 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 POLR3GO15318 223 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 DAPK3O43293 454 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 MED7O43513 233 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 VDRP11473 427 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 KRT10P13645 584 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 KCNE1P15382 129 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 HLTFQ14527 1009 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLK1-210ENST00000473565 PCBP1Q15365 356 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLK1-210ENST00000473565 KCNT1Q5JUK3 1230 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 PPP1R15BQ5SWA1 713 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 PMF1Q6P1K2 205 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 AGMOQ6ZNB7 445 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 RNF180Q86T96 592 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 TSEN2Q8NCE0 465 aaKnown RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 HASPINQ8TF76 798 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 RIN2Q8WYP3 895 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 MAGOHBQ96A72 148 aaKnown RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 CALR3Q96L12 384 aaKnown RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 B3GNT5Q9BYG0 378 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 GDF3Q9NR23 364 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 TTC7AQ9ULT0 858 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 DERAQ9Y315 318 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 PTCH2Q9Y6C5 1203 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 ARL5CA6NH57 179 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 F8W810 466 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 MAP2K7O14733 419 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 GABBR2O75899 941 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 RALAP11233 206 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 KRT3P12035 628 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 CLCNKBP51801 687 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 GYS2P54840 703 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 LILRA4P59901 499 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 PAK2Q13177 524 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 SIX1Q15475 284 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 CNGA2Q16280 664 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 XKR4Q5GH76 650 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 FAM102AQ5T9C2 384 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 KAZNQ674X7 775 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 LHX8Q68G74 356 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 TRNP1Q6NT89 227 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 FAM183BPQ6ZVS7 135 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 HDXQ7Z353 690 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 IFT20Q8IY31 132 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms