RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PCSK5Q92824 1860 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 NEDD4P46934 1319 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 BAZ2BQ9UIF8 2168 aaKnown RBP7.28□□□□□ -1.24
HDAC3-206ENST00000471968 N4BP3O15049 544 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 FGAP02671 866 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 KRT7P08729 469 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 SRGAP2CP0DJJ0 459 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 OPRD1P41143 372 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 BRCC3P46736 316 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 IFNAR2P48551 515 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 EPHB3P54753 998 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 SKOR1P84550 965 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 ST3GAL1Q11201 340 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 PLD1Q13393 1074 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 MTERF2Q49AM1 385 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 CEP55Q53EZ4 464 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 DCAF12L1Q5VU92 463 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 NOTUMQ6P988 496 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 SRGAP1Q7Z6B7 1085 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 ATP2A3Q93084 1043 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 IGSF8Q969P0 613 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 MARVELD3Q96A59 401 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 ZSCAN10Q96SZ4 725 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-206ENST00000471968 EIF2B4Q9UI10 523 aaKnown RBP7.28□□□□□ -1.24
HDAC3-206ENST00000471968 FBXL5Q9UKA1 691 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 ANKRD6Q9Y2G4 727 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 NFE2L3Q9Y4A8 694 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 PCDHA10Q9Y5I2 948 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 TACC2O95359 2948 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 LRRK1Q38SD2 2015 aa7.28□□□□□ -1.24
HDAC3-206ENST00000471968 LAD1O00515 517 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 DHX15O43143 795 aaKnown RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 ZBTB24O43167 697 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 TRAPPC3O43617 180 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 MARCH6O60337 910 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 SYNCRIPO60506 623 aaKnown RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 TSPAN1O60635 241 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 RTN2O75298 545 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 FGF19O95750 216 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 DDAH2O95865 285 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 PRKCGP05129 697 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 THP07101 528 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 CHRM1P11229 460 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 DRD2P14416 443 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 CPB1P15086 417 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 RBMS1P29558 406 aaKnown RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 AFF3P51826 1226 aaKnown RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 MESP2Q0VG99 397 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 NR1H3Q13133 447 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 SRSF6Q13247 344 aaKnown RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 ILKQ13418 452 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 MTF1Q14872 753 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 CTXN3Q4LDR2 81 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 DCAF6Q58WW2 860 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 ZMYM1Q5SVZ6 1142 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 CAPRIN2Q6IMN6 1127 aaKnown RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 LAYNQ6UX15 382 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 DNAJB7Q7Z6W7 309 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 EFCAB13Q8IY85 973 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 EID2Q8N6I1 236 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 OSCP1Q8WVF1 389 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 FRAT1Q92837 279 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 CCDC51Q96ER9 411 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 PRIMPOLQ96LW4 560 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 PGLYRP2Q96PD5 576 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 GCNAQ96QF7 691 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 GPR174Q9BXC1 333 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 PSTPIP2Q9H939 334 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 TDP1Q9NUW8 608 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 ATXN7L1Q9ULK2 861 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-206ENST00000471968 SLCO1B1Q9Y6L6 691 aa7.27□□□□□ -1.25
HDAC3-206ENST00000471968 SDK2Q58EX2 2172 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ZFC3H1O60293 1989 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 IGKV6-21A0A0C4DH24 114 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ARHGAP10A1A4S6 786 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 TMEM150BA6NC51 233 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 H7C4K7 107 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 MEIS1O00470 390 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 PTGESO14684 152 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 IPO8O15397 1037 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 VPS4BO75351 444 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 NPTXRO95502 500 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 PCP11498 1178 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 HOXB2P14652 356 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 CD6P30203 668 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ADRA1BP35368 520 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 TNFSF9P41273 254 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 WASP42768 502 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ALDH1A3P47895 512 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 CLCNKBP51801 687 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 CYP4F2P78329 520 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 USP4Q13107 963 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 TARBP2Q15633 366 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ALX1Q15699 326 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 NAB2Q15742 525 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 UGCGQ16739 394 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ZXDCQ2QGD7 858 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 C3orf38Q5JPI3 329 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms