RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 HOXC13P31276 330 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 CTHP32929 405 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 HOXD13P35453 343 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 AVPR1AP37288 418 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 MYL7Q01449 175 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 LRRC32Q14392 662 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 NFE2Q16621 373 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-210ENST00000469897 CCDC142Q17RM4 750 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 SOWAHAQ2M3V2 549 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 DGKKQ5KSL6 1271 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 C1orf228Q6PIY5 440 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 Q6ZS52 159 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 OSTM1Q86WC4 334 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 TMEM86AQ8N2M4 240 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 RDH13Q8NBN7 331 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 OR5B17Q8NGF7 314 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 USP13Q92995 863 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-210ENST00000469897 MSANTD3Q96H12 275 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 IER2Q9BTL4 223 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 MTMR12Q9C0I1 747 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 INTS13Q9NVM9 706 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 C2orf42Q9NWW7 574 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 GDAP2Q9NXN4 497 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 VPS13AQ96RL7 3174 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 PTPRJQ12913 1337 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 TRIP11Q15643 1979 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 CHURC1-FNTBB4DL54 471 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 GABRDO14764 452 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 HRO43593 1189 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 ATP2C2O75185 946 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 CSH1P0DML2 217 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 CSH2P0DML3 217 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 LMO2P25791 158 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 FNTBP49356 437 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 RPL10AP62906 217 aaKnown RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 E2F4Q16254 413 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 RSPO4Q2I0M5 234 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 ITPRIPL2Q3MIP1 535 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 FOXD4L6Q3SYB3 417 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 INTS6LQ5JSJ4 861 aaKnown RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 TRIM68Q6AZZ1 485 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 DGLUCYQ7Z3D6 616 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 MON1AQ86VX9 555 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 CBWD2Q8IUF1 395 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 DHX58Q96C10 678 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 HPDLQ96IR7 371 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 ANKRD36BP1Q96IX9 119 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 CYP2S1Q96SQ9 504 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 FAM83CQ9BQN1 747 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 TRIM9Q9C026 710 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 TNMDQ9H2S6 317 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 TDP1Q9NUW8 608 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 KBTBD4Q9NVX7 518 aa14.26□□□□□ -0.13
CPSF4-210ENST00000469897 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
CPSF4-210ENST00000469897 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 PPP6R2O75170 966 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 PDGFRBP09619 1106 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 TGM1P22735 817 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 LHX1P48742 406 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 AMPD3Q01432 767 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 MYO1EQ12965 1108 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 SRSF5Q13243 272 aaKnown RBP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 RUNX3Q13761 415 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 PUM1Q14671 1186 aaKnown RBP eCLIP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 HEATR6Q6AI08 1181 aaKnown RBP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 PRR23BQ6ZRT6 265 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 STXBP4Q6ZWJ1 553 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 SPATA2LQ8IUW3 424 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 SCN4BQ8IWT1 228 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 ADGRF2Q8IZF7 708 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 TOP6BLQ8N6T0 577 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 GPR161Q8N6U8 529 aaKnown RBP14.25□□□□□ -0.13
CPSF4-210ENST00000469897 TTC16Q8NEE8 873 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 RIN3Q8TB24 985 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 ZNF507Q8TCN5 953 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 EBF3Q9H4W6 596 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 HPS4Q9NQG7 708 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 DLL3Q9NYJ7 618 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 HSPBP1Q9NZL4 362 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 MYH15Q9Y2K3 1946 aa14.25□□□□□ -0.13
CPSF4-210ENST00000469897 K7ESF4 209 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 KIAA0391O15091 583 aaKnown RBP14.24□□□□□ -0.13
CPSF4-210ENST00000469897 CUTAO60888 179 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 TNNC2P02585 160 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 DDX6P26196 483 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPSF4-210ENST00000469897 ASIC1P78348 528 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 CCINQ13939 588 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 SIM2Q14190 667 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-210ENST00000469897 SURF1Q15526 300 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms