RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FBXW11Q9UKB1 542 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 GTF3C4Q9UKN8 822 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 LAMA3Q16787 3333 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 PATJQ8NI35 1801 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CCDC195A0A1B0GUA6 201 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 MTMR11A4FU01 709 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 LGALS16A8MUM7 142 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 TRIM66O15016 1216 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 MED7O43513 233 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 FGF19O95750 216 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 OR4Q2P0C623 313 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CCDC172P0C7W6 258 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 SPATA31D3P0C874 917 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 KRT5P13647 590 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CD19P15391 556 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 PTPN1P18031 435 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 IGFBP6P24592 240 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 GRIK1P39086 918 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 USP8P40818 1118 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 ASPAP45381 313 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 RAP1GAPP47736 663 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CDH8P55286 799 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 UBASH3AP57075 661 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 BPIFB4P59827 614 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 PSMC1P62191 440 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 PLCB2Q00722 1185 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 INCA1Q0VD86 236 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 DUSP4Q13115 394 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 NCAPHQ15003 741 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 STILQ15468 1287 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 LEXMQ3ZCV2 418 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CFAP221Q4G0U5 840 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 MDH1BQ5I0G3 518 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 RARS2Q5T160 578 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CYP4A22Q5TCH4 519 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 LILRA6Q6PI73 481 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 TMEM270Q6UE05 265 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 VSTM1Q6UX27 236 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 RNF19BQ6ZMZ0 732 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 SPATA31D4Q6ZUB0 917 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CACNA2D4Q7Z3S7 1137 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 LUZP1Q86V48 1076 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 DHX40Q8IX18 779 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CMASQ8NFW8 434 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 NEK11Q8NG66 645 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 OR10T2Q8NGX3 314 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 MYCBPAPQ8TBZ2 947 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 KBTBD7Q8WVZ9 684 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 ATXN2LQ8WWM7 1075 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 SMG7Q92540 1137 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 TATDN2Q93075 761 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 SMARCD1Q96GM5 515 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 TMEM176AQ96HP8 235 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CEP295NLQ96MC4 621 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 HEXIM2Q96MH2 286 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 SPAG5Q96R06 1193 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 MRPL45Q9BRJ2 306 aaKnown RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 PRKD2Q9BZL6 878 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 UBE2TQ9NPD8 197 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 CISHQ9NSE2 258 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 UXTQ9UBK9 157 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 HESX1Q9UBX0 185 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 KIAA1257Q9ULG3 409 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 ASB3Q9Y575 518 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 PCDHB4Q9Y5E5 795 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 INSL5Q9Y5Q6 135 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 ANAPC1Q9H1A4 1944 aa6.79□□□□□ -1.32
SF3B1-206ENST00000462613 NUP210Q8TEM1 1887 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-206ENST00000462613 DOCK8Q8NF50 2099 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 MYO10Q9HD67 2058 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 HELZP42694 1942 aaKnown RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 LRRC10BA6NIK2 292 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 H3BQ06 376 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF197O14709 1029 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 LINC01565O15544 149 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ADAM12O43184 909 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 TBX10O75333 385 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CILPO75339 1184 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 GLP2RO95838 553 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 POU2F2P09086 479 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PAEPP09466 180 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 TPM1P09493 284 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 FAM200BP0CF97 657 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CSH1P0DML2 217 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CSH2P0DML3 217 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 VDRP11473 427 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ATP1A3P13637 1013 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF18P17022 549 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PTPN2P17706 415 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 SLC9A1P19634 815 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 LMO2P25791 158 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PON1P27169 355 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 MAGEA11P43364 429 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 MRPS5P82675 430 aaKnown RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PTK2Q05397 1052 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 TWF1Q12792 350 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms