RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SHDQ96IW2 340 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 PKMYT1Q99640 499 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 SYT15Q9BQS2 421 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 PI4K2AQ9BTU6 479 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 FOXQ1Q9C009 403 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 GPR88Q9GZN0 384 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 GZF1Q9H116 711 aaPredicted RBP10.91□□□□□ -0.66
SF3A3-204ENST00000462258 IRF2BPLQ9H1B7 796 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 ATXN3LQ9H3M9 355 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 USP34Q70CQ2 3546 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 GABRDO14764 452 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 RHOBTB3O94955 611 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 CLSTN1O94985 981 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 KIF20AO95235 890 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 NR3C1P04150 777 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 PSMC3P17980 439 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 CDC25CP30307 473 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 VIPR2P41587 438 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 CASP4P49662 377 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 GPR15P49685 360 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 MRE11P49959 708 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 STARD6P59095 220 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 PSMC1P62191 440 aaKnown RBP10.9□□□□□ -0.66
SF3A3-204ENST00000462258 TNNC1P63316 161 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 NUCB2P80303 420 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 CYP4F8P98187 520 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 DPYDQ12882 1025 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 GPR158Q5T848 1215 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 VITQ6UXI7 678 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 DPH6Q7L8W6 267 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 LIMS2Q7Z4I7 341 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 ALYREFQ86V81 257 aaKnown RBP10.9□□□□□ -0.66
SF3A3-204ENST00000462258 SLC9A9Q8IVB4 645 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 DTWD2Q8NBA8 298 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 STKLD1Q8NE28 680 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 MYLPFQ96A32 169 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 MMS19Q96T76 1030 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 PHOX2BQ99453 314 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
SF3A3-204ENST00000462258 TRMT61BQ9BVS5 477 aaKnown RBP10.9□□□□□ -0.66
SF3A3-204ENST00000462258 KCTD10Q9H3F6 313 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 BRD9Q9H8M2 597 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 TRPV4Q9HBA0 871 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 ABCB6Q9NP58 842 aa10.9□□□□□ -0.66
SF3A3-204ENST00000462258 ANAPC1Q9H1A4 1944 aa10.9□□□□□ -0.67
SF3A3-204ENST00000462258 KANSL1LA0AUZ9 987 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 MYBPHLA2RUH7 354 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 LRRIQ3A6PVS8 624 aaPredicted RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 HEPACAM2A8MVW5 462 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 PDXKO00764 312 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 ZNF202O95125 648 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 DCNP07585 359 aaKnown RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 WARSP23381 471 aaKnown RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 CYP2F1P24903 491 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 GDI1P31150 447 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 BIRC3Q13489 604 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 TRPC3Q13507 836 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 UBXN2BQ14CS0 331 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 CFAP221Q4G0U5 840 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 SLC44A4Q53GD3 710 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 SDHAF4Q5VUM1 108 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 C4orf50Q6ZRC1 276 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 SPATA2LQ8IUW3 424 aaPredicted RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 PLEKHO2Q8TD55 490 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 TMEM174Q8WUU8 243 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 IRF7Q92985 503 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 SYAP1Q96A49 352 aaPredicted RBP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 E2F7Q96AV8 911 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 RSPRY1Q96DX4 576 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 FUBP3Q96I24 572 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3A3-204ENST00000462258 LTB4R2Q9NPC1 389 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 HEBP1Q9NRV9 189 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 DMAC2Q9NW81 257 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 GTF3C4Q9UKN8 822 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 SIT1Q9Y3P8 196 aa10.89□□□□□ -0.67
SF3A3-204ENST00000462258 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 ZNF263O14978 683 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 PHACTR2O75167 634 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 LRRN2O75325 713 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 TACC1O75410 805 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 PRAMEF12O95522 483 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 CST3P01034 146 aaPredicted RBP10.88□□□□□ -0.67
SF3A3-204ENST00000462258 CSH1P0DML2 217 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 CSH2P0DML3 217 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 HMGA1P17096 107 aaKnown RBP10.88□□□□□ -0.67
SF3A3-204ENST00000462258 NR2F2P24468 414 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 LMO2P25791 158 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 ATICP31939 592 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 AP3M2P53677 418 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 MYL6P60660 151 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 RPL10AP62906 217 aaKnown RBP10.88□□□□□ -0.67
SF3A3-204ENST00000462258 KCNB1Q14721 858 aa10.88□□□□□ -0.67
SF3A3-204ENST00000462258 ANGPT1Q15389 498 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms