RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 COILP38432 576 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 LMNB2Q03252 620 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 PTGISQ16647 500 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 IZUMO3Q5VZ72 239 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 VCXQ9H320 206 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 AFG3L2Q9Y4W6 797 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 TJP3O95049 919 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 ZBED1O96006 694 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 CALB1P05937 261 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 KRT3P12035 628 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SCTRP47872 440 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SCNN1BP51168 640 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 MYL6P60660 151 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 MYBPC2Q14324 1141 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 MUM1Q2TAK8 710 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 DAB2IPQ5VWQ8 1189 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SAMD3Q8N6K7 520 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 PCSK9Q8NBP7 692 aaKnown RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 MTMR14Q8NCE2 650 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 MORC4Q8TE76 937 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 GMLQ99445 158 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SNTG2Q9NY99 539 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 TYW5A2RUC4 315 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 GZMAP12544 262 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 KRT10P13645 584 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 NOVP48745 357 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 HSD17B4P51659 736 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 GTF2BQ00403 316 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CUL2Q13617 745 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 MFSD10Q14728 455 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SKIV2LQ15477 1246 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ASTE1Q2TB18 679 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 LLGL2Q6P1M3 1020 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 MPZL3Q6UWV2 235 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ARHGAP22Q7Z5H3 698 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ARRDC4Q8NCT1 418 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SREK1Q8WXA9 508 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ATP8B3O60423 1300 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 PRRC2BQ5JSZ5 2229 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 TMEM88BA6NKF7 163 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 RAP1GAPP47736 663 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SLC26A2P50443 739 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ACOT1Q86TX2 421 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 DAW1Q8N136 415 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 KIF2BQ8N4N8 673 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SOCS4Q8WXH5 440 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CLEC4DQ8WXI8 215 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SEMA4DQ92854 862 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CNOT10Q9H9A5 744 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 PARVAQ9NVD7 372 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ANKRD36CQ5JPF3 1778 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 GAS2O43903 313 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 LCA5LO95447 670 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 PDGFRAP16234 1089 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 GARTP22102 1010 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 FOXR2Q6PJQ5 311 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
TOP3B-210ENST00000444502 MAP4K3Q8IVH8 894 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 ATL2Q8NHH9 583 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CAVIN3Q969G5 261 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 NT5C1AQ9BXI3 368 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 IP6K2Q9UHH9 426 aa11.11□□□□□ -0.63
TOP3B-210ENST00000444502 CHD4Q14839 1912 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 DCDC2CA8MYV0 355 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 ATP6V1G2O95670 118 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 ALDH3A1P30838 453 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 AP3M2P53677 418 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 SNRPFP62306 86 aaKnown RBP11.1□□□□□ -0.63
TOP3B-210ENST00000444502 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 ALG3Q92685 438 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
TOP3B-210ENST00000444502 SPON2Q9BUD6 331 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 GDF3Q9NR23 364 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 STRIP2Q9ULQ0 834 aa11.1□□□□□ -0.63
TOP3B-210ENST00000444502 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms