RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 ZDHHC14Q8IZN3 488 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 TDRD5Q8NAT2 981 aaKnown RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 LEMD2Q8NC56 503 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 MYCBPAPQ8TBZ2 947 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 SEMA4DQ92854 862 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 ACSF2Q96CM8 615 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 TNIP3Q96KP6 325 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 CNOT6LQ96LI5 555 aaKnown RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 PI4K2AQ9BTU6 479 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 BCO2Q9BYV7 579 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 APOBEC3GQ9HC16 384 aaKnown RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 TMLHEQ9NVH6 421 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 ABI2Q9NYB9 513 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 TMEM63CQ9P1W3 806 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 HCRTO43612 131 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 RAP1GAPP47736 663 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 KCNH2Q12809 1159 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 VEPH1Q14D04 833 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 SCARA5Q6ZMJ2 495 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 ITIH5Q86UX2 942 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 TTC9BQ8N6N2 239 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 B3GALNT2Q8NCR0 500 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 ENOX1Q8TC92 643 aaKnown RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 SEPT5Q99719 369 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 CRTAC1Q9NQ79 661 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 CEP72Q9P209 647 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 ZFP37Q9Y6Q3 630 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-206ENST00000439717 C2orf16Q68DN1 1984 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 DENND4AQ7Z401 1863 aa12.61□□□□□ -0.39
HSPG2-206ENST00000439717 C2CD4DB7Z1M9 353 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 TNFRSF10AO00220 468 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 ZNF197O14709 1029 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 ATP2C2O75185 946 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 MICAL2O94851 1124 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-206ENST00000439717 FGF19O95750 216 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 RHOP08100 348 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-206ENST00000439717 MAGEA11P43364 429 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 EPHA5P54756 1037 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 RPL10AP62906 217 aaKnown RBP12.6□□□□□ -0.39
HSPG2-206ENST00000439717 NTHL1P78549 312 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 CYP4A22Q5TCH4 519 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 PDZD4Q76G19 769 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-206ENST00000439717 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 CRYBG2Q8N1P7 616 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 PSMG2Q969U7 264 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 MYLPFQ96A32 169 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 ELMO3Q96BJ8 720 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 PCED1BQ96HM7 432 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 CEP295NLQ96MC4 621 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 CORO1BQ9BR76 489 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.39
HSPG2-206ENST00000439717 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 EPS15L1Q9UBC2 864 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 VCANP13611 3396 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 C5orf42Q9H799 3197 aa12.6□□□□□ -0.39
HSPG2-206ENST00000439717 DLL1O00548 723 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 LRRN2O75325 713 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 SOAT2O75908 522 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 ATF6P18850 670 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 CYP2F1P24903 491 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 GBP2P32456 591 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-206ENST00000439717 MTIF2P46199 727 aaKnown RBP12.59□□□□□ -0.39
HSPG2-206ENST00000439717 NDST1P52848 882 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 TYRO3Q06418 890 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 SKOR2Q2VWA4 1001 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-206ENST00000439717 MDH1BQ5I0G3 518 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 PRSS36Q5K4E3 855 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 GET4Q7L5D6 327 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-206ENST00000439717 DNAJB7Q7Z6W7 309 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-206ENST00000439717 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 FAM200AQ8TCP9 573 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 CDH7Q9ULB5 785 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 MRPS23Q9Y3D9 190 aaKnown RBP12.59□□□□□ -0.39
HSPG2-206ENST00000439717 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
HSPG2-206ENST00000439717 CILPO75339 1184 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms