RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 SYT15Q9BQS2 421 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 PLA2G2FQ9BZM2 168 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 SNX25Q9H3E2 840 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 ZNF334Q9HCZ1 680 aaPredicted RBP16.41■□□□□ 0.22
NUP50-204ENST00000417702 GTF3C4Q9UKN8 822 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 CDH9Q9ULB4 789 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 TRAF3IP3Q9Y228 551 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 KMT2EQ8IZD2 1858 aa16.41■□□□□ 0.22
NUP50-204ENST00000417702 PI15O43692 258 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 FAM163BP0C2L3 166 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 PSMC3P17980 439 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 CASP4P49662 377 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 MYL6P60660 151 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 PRKCQQ04759 706 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 TCF15Q12870 199 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 MAPRE1Q15691 268 aaKnown RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 MLF2Q15773 248 aaPredicted RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 GPR158Q5T848 1215 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 GAREM2Q75VX8 874 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 FMR1NBQ8N0W7 255 aaPredicted RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 GUF1Q8N442 669 aaKnown RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 DEPDC1BQ8WUY9 529 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 KBTBD7Q8WVZ9 684 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
NUP50-204ENST00000417702 TRMT61BQ9BVS5 477 aaKnown RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
NUP50-204ENST00000417702 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 TRPV4Q9HBA0 871 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
NUP50-204ENST00000417702 MYBPHLA2RUH7 354 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 HCRTO43612 131 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 TACC1O75410 805 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 STAU1O95793 577 aaKnown RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 CSH1P0DML2 217 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 CSH2P0DML3 217 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 CYP2F1P24903 491 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 LMO2P25791 158 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 RPL13P26373 211 aaKnown RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 VIPR2P41587 438 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 STARD6P59095 220 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 CLDN10P78369 228 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 FAM160A1Q05DH4 1040 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 GRM2Q14416 872 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 FAM171BQ6P995 826 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 OR6B3Q8NGW1 331 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 TMC2Q8TDI7 906 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 PKMYT1Q99640 499 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 NXF1Q9UBU9 619 aaKnown RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 HOOK1Q9UJC3 728 aaKnown RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
NUP50-204ENST00000417702 SIT1Q9Y3P8 196 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 F5P12259 2224 aa16.39■□□□□ 0.21
NUP50-204ENST00000417702 HEPACAM2A8MVW5 462 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 DPYSL4O14531 572 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 SMC2O95347 1197 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 NR2F2P24468 414 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 GPR15P49685 360 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 PSMC1P62191 440 aaKnown RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 PNOCQ13519 176 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 NCOA4Q13772 614 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 NFIL3Q16649 462 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 DDR2Q16832 855 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 STXBP5Q5T5C0 1151 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 TDRD10Q5VZ19 366 aaKnown RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 VITQ6UXI7 678 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 ARID3BQ8IVW6 561 aaPredicted RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 MFSD6LQ8IWD5 586 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 SCN4BQ8IWT1 228 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 YAF2Q8IY57 180 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 CCDC105Q8IYK2 499 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 IRF7Q92985 503 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 MRPL45Q9BRJ2 306 aaKnown RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 TASP1Q9H6P5 420 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 IL21Q9HBE4 155 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 MAGEC2Q9UBF1 373 aaPredicted RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 UXTQ9UBK9 157 aaPredicted RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 ZMYM5Q9UJ78 669 aa16.38■□□□□ 0.21
NUP50-204ENST00000417702 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
NUP50-204ENST00000417702 KANSL1LA0AUZ9 987 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 H0Y858 1186 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 IKBKBO14920 756 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 ZNF263O14978 683 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 MAPK13O15264 365 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 ATP2C2O75185 946 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
NUP50-204ENST00000417702 KRT13P13646 458 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 GDI1P31150 447 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 MAGEA11P43364 429 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 CYP4F8P98187 520 aa16.37■□□□□ 0.21
NUP50-204ENST00000417702 ZNF699Q32M78 642 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms