RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 TMEM189-UBE2V1I3L0A0 370 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 ASAP2O43150 1006 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 CD59P13987 128 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 LIG1P18858 919 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 CYP3A7P24462 503 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 USP11P51784 963 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 C19orf57Q0VDD7 668 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 NECTIN1Q15223 517 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 ITPRIPL2Q3MIP1 535 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 CTXN3Q4LDR2 81 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 ARHGAP29Q52LW3 1261 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 GPR158Q5T848 1215 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 IQCEQ6IPM2 695 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 PDXDC1Q6P996 788 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 CCNI2Q6ZMN8 369 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 RTL10Q7L3V2 364 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 SFTPA1Q8IWL2 248 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 BEND7Q8N7W2 519 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 BSNDQ8WZ55 320 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 MSANTD3Q96H12 275 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 ZMAT2Q96NC0 199 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 FNBP1Q96RU3 617 aa9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 HNRNPABQ99729 332 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 GTPBP2Q9BX10 602 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 POLR3FQ9H1D9 316 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 NAP1L2Q9ULW6 460 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 TIMM13Q9Y5L4 95 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 NUP210Q8TEM1 1887 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-206ENST00000416651 TRDMT1O14717 391 aaKnown RBP9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 SH3BP5O60239 455 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 P4HBP07237 508 aaKnown RBP9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 ITPKBP27987 946 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 PTGIRP43119 386 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 NPY5RQ15761 445 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 FOXD4L5Q5VV16 416 aaPredicted RBP9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 ANO7Q6IWH7 933 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 SYNE3Q6ZMZ3 975 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 TTC30AQ86WT1 665 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 TEX2Q8IWB9 1127 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 HACE1Q8IYU2 909 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 STKLD1Q8NE28 680 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 BPIFB1Q8TDL5 484 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 TCP11Q8WWU5 503 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 HAS1Q92839 578 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 C18orf25Q96B23 403 aaPredicted RBP9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 FAM83CQ9BQN1 747 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 SLC46A2Q9BY10 475 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 ATXN3LQ9H3M9 355 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 SLC32A1Q9H598 525 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 EBF1Q9UH73 591 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 RAI2Q9Y5P3 530 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 PCDH15Q96QU1 1955 aa9.49□□□□□ -0.89
NIF3L1-206ENST00000416651 SMIM28A0A1B0GU29 152 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 LRRIQ4A6NIV6 560 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 M0R2N6 131 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 SLITRK3O94933 977 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 APBB3O95704 486 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 PROCP04070 461 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 FTH1P19P0C7X4 201 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 ITPKAP23677 461 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 GABRR2P28476 465 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 SEC13P55735 322 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 OSTNP61366 133 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 CYP4F3Q08477 520 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 MESP2Q0VG99 397 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 GRSF1Q12849 480 aaKnown RBP eCLIP9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 DUSP4Q13115 394 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 PSMD2Q13200 908 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 PPP2R5CQ13362 524 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 RUNX3Q13761 415 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 NTRK3Q16288 839 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 INF2Q27J81 1249 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 NCAPH2Q6IBW4 605 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 PCSK4Q6UW60 755 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 C4orf19Q8IY42 314 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 ELMOD1Q8N336 334 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 CCDC33Q8N5R6 958 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 GALNT6Q8NCL4 622 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 MDGA1Q8NFP4 955 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 PIGOQ8TEQ8 1089 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 AIFM3Q96NN9 605 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 SLKQ9H2G2 1235 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 FZD8Q9H461 694 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 AFF4Q9UHB7 1163 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 EVLQ9UI08 416 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 ZMYM2Q9UBW7 1377 aa9.48□□□□□ -0.89
NIF3L1-206ENST00000416651 PODXLO00592 558 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 ATG13O75143 517 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 KRT10P13645 584 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 GJA4P35212 333 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 RAB15P59190 212 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 POU5F1BQ06416 359 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 TFDP1Q14186 410 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 MXD4Q14582 209 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 EPHA7Q15375 998 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms