RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 STXBP3O00186 592 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MEIS2O14770 477 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 SEPT4O43236 478 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 KINO60870 393 aaKnown RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 RTN2O75298 545 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 SMC2O95347 1197 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 BAG4O95429 457 aaKnown RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 SGPL1O95470 568 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 B3GALT4O96024 378 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PGK1P00558 417 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PSAPP07602 524 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 POU2F2P09086 479 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 POLR2MP0CAP2 368 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MYCLP12524 364 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 IDEP14735 1019 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 CNTFP26441 200 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 USP8P40818 1118 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PRPHP41219 470 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 TECP42680 631 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 FXR1P51114 621 aaKnown RBP eCLIP4.93□□□□□ -1.625e-6■■■□□ 17.4
SF3B1-202ENST00000409915 HSD17B4P51659 736 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MRPL12P52815 198 aaKnown RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 RCAN1P53805 252 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 EVCP57679 992 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PCDH1Q08174 1060 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 KCNMA1Q12791 1236 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PPP2R5CQ13362 524 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ACVR2BQ13705 512 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 CRYMQ14894 314 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 SF1Q15637 639 aaKnown RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PKN1Q16512 942 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 CLEC16AQ2KHT3 1053 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MFSD4BQ5TF39 518 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ARHGEF16Q5VV41 709 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 IZUMO3Q5VZ72 239 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 LYPD4Q6UWN0 246 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MAMDC4Q6UXC1 1216 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 DSTYKQ6XUX3 929 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 LEKR1Q6ZMV7 388 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 CCDC186Q7Z3E2 898 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 DENND1CQ8IV53 801 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 FBXL16Q8N461 479 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ZSCAN18Q8TBC5 510 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 TRAPPC12Q8WVT3 735 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 JADE3Q92613 823 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 COPS5Q92905 334 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ARL8AQ96BM9 186 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PLPPR2Q96GM1 343 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MRGPRX3Q96LB0 322 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 DHRS1Q96LJ7 313 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 NT5C1BQ96P26 610 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 NUP62CLQ9H1M0 184 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 TIMMDC1Q9NPL8 285 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 CYP26B1Q9NR63 512 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PXMP2Q9NR77 195 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 LMBRD1Q9NUN5 540 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 VPS54Q9P1Q0 977 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 B4GALT6Q9UBX8 382 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 LCMT1Q9UIC8 334 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PCDHA4Q9UN74 947 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 MAGED2Q9UNF1 606 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 CORO2BQ9UQ03 480 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 PCDHGB2Q9Y5G2 931 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ASB14A6NK59 587 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 A6NLC8 198 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TRIM64CA6NLI5 447 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 RHPN2P1A8MT19 583 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CHURC1-FNTBB4DL54 471 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 H3BML4 177 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 KIF2AO00139 706 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 AQP7O14520 342 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CPLX1O14810 134 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 FRS3O43559 492 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 B3GALT2O43825 422 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 AHCYL1O43865 530 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 JAK2O60674 1132 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PFKFB2O60825 505 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 UBXN7O94888 489 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CTDNEP1O95476 244 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 DNTTP04053 509 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 POLBP06746 335 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 RARBP10826 455 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 MTHFD1P11586 935 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 SKILP12757 684 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 SCG2P13521 617 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ATP1A3P13637 1013 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 AKR1A1P14550 325 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 IFNAR1P17181 557 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 EDNRBP24530 442 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PEX19P40855 299 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 STAT1P42224 750 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GPR3P46089 330 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CASP5P51878 434 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 COPAP53621 1224 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CLNS1AP54105 237 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ATXN1P54253 815 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 NAP1L1P55209 391 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 BEX3Q00994 111 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms