RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SCN1AP35498 2009 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 KAT6AQ92794 2004 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 FOXO6A8MYZ6 492 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 H0YHG0 523 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 PIK3R2O00459 728 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 ASAP2O43150 1006 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 IL18RAPO95256 599 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 MMP3P08254 477 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 ZSCAN5DPP0CG00 497 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 MCF2P10911 925 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 ETS1P14921 441 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 PPP2R2AP63151 447 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 CCNA1P78396 465 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 IRX1P78414 480 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 KIZQ2M2Z5 673 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 SPDYCQ5MJ68 293 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 NPLOC4Q8TAT6 608 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 SNF8Q96H20 258 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 MAML3Q96JK9 1138 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 RUNDC3BQ96NL0 473 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 PPANQ9NQ55 473 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 PARP2Q9UGN5 583 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 MCM8Q9UJA3 840 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 DNPEPQ9ULA0 475 aa16.03■□□□□ 0.16
SCAMP4-202ENST00000409472 NDUFAB1O14561 156 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 CYP3A5P20815 502 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 EIF4BP23588 611 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 IL1R2P27930 398 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 C11orf91Q3C1V1 193 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 RAB6CQ53S08 254 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 RNF217Q8TC41 542 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 RAB6CQ9H0N0 254 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 WHRNQ9P202 907 aa16.02■□□□□ 0.16
SCAMP4-202ENST00000409472 PPEF2O14830 753 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 CILPO75339 1184 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 CETPP11597 493 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 RARGP13631 454 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 ATF2P15336 505 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 CCDC38Q502W7 563 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 FAM182AQ5T1J6 154 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 DPP9Q86TI2 863 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 SPATS2Q86XZ4 545 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 EMID1Q96A84 441 aaPredicted RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 PIWIL1Q96J94 861 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 FAM49AQ9H0Q0 323 aaPredicted RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 CDHR5Q9HBB8 845 aa16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 METTL5Q9NRN9 209 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 SAE1Q9UBE0 346 aaPredicted RBP16.02■□□□□ 0.15
SCAMP4-202ENST00000409472 LRRD1A4D1F6 860 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 MICAL2O94851 1124 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 GBP1P32455 592 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 ADCY8P40145 1251 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 EIF3BP55884 814 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 PTPN11Q06124 597 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 CCNG2Q16589 344 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 LONRF1Q17RB8 773 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 SPOCD1Q6ZMY3 1216 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 ATL2Q8NHH9 583 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 EPN3Q9H201 632 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 ZWILCHQ9H900 591 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 CTNNAL1Q9UBT7 734 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 HES2Q9Y543 173 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 LRCH4O75427 683 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 KIAA0754O94854 1291 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 GAS8O95995 478 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 KLRC2P26717 231 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 SARNPP82979 210 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 GRB14Q14449 540 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 TMEM132DQ14C87 1099 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 TAF5Q15542 800 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 XYLT1Q86Y38 959 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 UBA3Q8TBC4 463 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 MYCBPAPQ8TBZ2 947 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 N4BP2L2Q92802 583 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 HPDLQ96IR7 371 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 MORF4L1Q9UBU8 362 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 GJD2Q9UKL4 321 aa16.01■□□□□ 0.15
SCAMP4-202ENST00000409472 hCG_1818297A0A087WSY0 165 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 E7EVH7 732 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 M0QYV0 167 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 MAGEB2O15479 319 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 LIASO43766 372 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 CD48P09326 243 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 PSMA2P25787 234 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 PSMC1P62191 440 aaKnown RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 DYNLT1P63172 113 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 SLC25A11Q02978 314 aaKnown RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 HIC1Q14526 733 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 HOOK3Q86VS8 718 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 NLRP14Q86W24 1093 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms