RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PIGWQ7Z7B1 504 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 ACOT1Q86TX2 421 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MAP4K3Q8IVH8 894 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 RHOT1Q8IXI2 618 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 CCNYQ8ND76 341 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 AFG1LQ8WV93 481 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 SERPINB12Q96P63 405 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 WHRNQ9P202 907 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 HMGXB4Q9UGU5 601 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 DYNC1LI2O43237 492 aaPredicted RBP14.08□□□□□ -0.16
COL6A2-204ENST00000409416 DNAJC8O75937 253 aaPredicted RBP14.08□□□□□ -0.16
COL6A2-204ENST00000409416 RNF8O76064 485 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MAPTP10636 758 aaKnown RBP14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MUTP22033 750 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 LAMTOR4Q0VGL1 99 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL6A2-204ENST00000409416 LACTB2Q53H82 288 aaPredicted RBP14.08□□□□□ -0.16
COL6A2-204ENST00000409416 FAM160B1Q5W0V3 765 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 JOSD2Q8TAC2 188 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 PPP1R14CQ8TAE6 165 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MAIP1Q8WWC4 291 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 SEPT1Q8WYJ6 367 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 KIF12Q96FN5 646 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 ANKRD36BP1Q96IX9 119 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 TMEM237Q96Q45 408 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MMP19Q99542 508 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 TRIM56Q9BRZ2 755 aaKnown RBP14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MRIQ9BWK5 157 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 PORCNQ9H237 461 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 SLCO1B3Q9NPD5 702 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 EXTL3O43909 919 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 DIAPH2O60879 1101 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 AVILO75366 819 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 NFICP08651 508 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 NQO1P15559 274 aaKnown RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 RFC1P35251 1148 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ADCYAP1R1P41586 468 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ABCG1P45844 678 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 IL9RQ01113 521 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 SETDB1Q15047 1291 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 DUOXA2Q1HG44 320 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 PREPLQ4J6C6 727 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 DENND1BQ6P3S1 775 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 NSMCE1Q8WV22 266 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 P3H4Q92791 437 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 RSRC1Q96IZ7 334 aaKnown RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 AGAP3Q96P47 875 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 SHCBP1LQ9BZQ2 653 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ROPN1BQ9BZX4 212 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 UNKQ9C0B0 810 aaKnown RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 IQCGQ9H095 443 aaKnown RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ROPN1Q9HAT0 212 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 TXNRD2Q9NNW7 524 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ARL2BPQ9Y2Y0 163 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 TAF1LQ8IZX4 1826 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 A0A0G2JND7 137 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 KIF1CO43896 1103 aaKnown RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 DKC1O60832 514 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 SKAP2O75563 359 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 KRT16P08779 473 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 RARBP10826 455 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 GHRP10912 638 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 HADHBP55084 474 aaKnown RBP14.07□□□□□ -0.16
COL6A2-204ENST00000409416 SGSM1Q2NKQ1 1148 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 SPDYCQ5MJ68 293 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ADAM32Q8TC27 787 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 AGAP11Q8TF27 550 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 HASPINQ8TF76 798 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 MAGEB5Q9BZ81 275 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 RNPEPQ9H4A4 650 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 KNL1Q8NG31 2342 aa14.07□□□□□ -0.16
COL6A2-204ENST00000409416 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
COL6A2-204ENST00000409416 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-204ENST00000409416 CCDC142Q17RM4 750 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 ERP27Q96DN0 273 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 SLC10A4Q96EP9 437 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 IL1RAPL1Q9NZN1 696 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 NEU2Q9Y3R4 380 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 ATP8B3O60423 1300 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 CDH16O75309 829 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 MYBL1P10243 752 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 PAX7P23759 505 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
COL6A2-204ENST00000409416 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 COPS2P61201 443 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 NCALDP61601 193 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 ATF7IP2Q5U623 682 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 CATSPER4Q7RTX7 472 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 SCUBE3Q8IX30 993 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 FITM2Q8N6M3 262 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 TMEM35BQ8NCS4 154 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 TFAP2BQ92481 460 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 DDX1Q92499 740 aaKnown RBP14.06□□□□□ -0.16
COL6A2-204ENST00000409416 B3GNT5Q9BYG0 378 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 HAPLN2Q9GZV7 340 aa14.06□□□□□ -0.16
COL6A2-204ENST00000409416 MINDY3Q9H8M7 445 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms