RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 METTL23Q86XA0 190 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 MNS1Q8NEH6 495 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 ZNF564Q8TBZ8 553 aaPredicted RBP18.38■□□□□ 0.53
CLDN4-201ENST00000340958 VCPIP1Q96JH7 1222 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 TUBB2BQ9BVA1 445 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 DPEP3Q9H4B8 488 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 TSPAN16Q9UKR8 245 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 O00370 1275 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 INPPL1O15357 1258 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 NCK2O43639 380 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 ODC1P11926 461 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 LMO2P25791 158 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 RFC2P35250 354 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 EPHB4P54760 987 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 FPGSQ05932 587 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 PTPROQ16827 1216 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 DCLRE1AQ6PJP8 1040 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 ZNF280BQ86YH2 543 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 TMEM86AQ8N2M4 240 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 C3orf58Q8NDZ4 430 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 UBA3Q8TBC4 463 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 MRPL47Q9HD33 250 aaKnown RBP18.37■□□□□ 0.53
CLDN4-201ENST00000340958 TBC1D13Q9NVG8 400 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 COG5Q9UP83 839 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 TIMM13Q9Y5L4 95 aaPredicted RBP18.37■□□□□ 0.53
CLDN4-201ENST00000340958 ARHGEF37A1IGU5 675 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 BUB1BO60566 1050 aaPredicted RBP18.37■□□□□ 0.53
CLDN4-201ENST00000340958 FAM163BP0C2L3 166 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 CSF2RAP15509 400 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 PAX3P23760 479 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 LHX1P48742 406 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 MESDQ14696 234 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
CLDN4-201ENST00000340958 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 LCLAT1Q6UWP7 414 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 PSMB7Q99436 277 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 GOLPH3Q9H4A6 298 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 ST7Q9NRC1 585 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 AMFRQ9UKV5 643 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 MRFAP1Q9Y605 127 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 SCINQ9Y6U3 715 aa18.37■□□□□ 0.53
CLDN4-201ENST00000340958 I3L4J1 428 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 HCRTO43612 131 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 MMP8P22894 467 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 IGFBP6P24592 240 aaPredicted RBP18.36■□□□□ 0.53
CLDN4-201ENST00000340958 RPS6KA1Q15418 735 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 TCTN1Q2MV58 587 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 TIGD5Q53EQ6 642 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 PAPD7Q5XG87 772 aaKnown RBP18.36■□□□□ 0.53
CLDN4-201ENST00000340958 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 AVENQ9NQS1 362 aaPredicted RBP18.36■□□□□ 0.53
CLDN4-201ENST00000340958 PARVAQ9NVD7 372 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 DDX43Q9NXZ2 648 aaKnown RBP18.36■□□□□ 0.53
CLDN4-201ENST00000340958 ANAPC7Q9UJX3 599 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 STRIP2Q9ULQ0 834 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 PACSIN2Q9UNF0 486 aaPredicted RBP18.36■□□□□ 0.53
CLDN4-201ENST00000340958 HYOU1Q9Y4L1 999 aa18.36■□□□□ 0.53
CLDN4-201ENST00000340958 TBKBP1A7MCY6 615 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 SRGAP2O75044 1071 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 DDHD2O94830 711 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 UPP2O95045 317 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 SLU7O95391 586 aaKnown RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 ACAT1P24752 427 aaKnown RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 ADORA2BP29275 332 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 CDH5P33151 784 aaPredicted RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 BRCC3P46736 316 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 PSMC1P62191 440 aaKnown RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 MEI1Q5TIA1 1274 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 DNAJC24Q6P3W2 148 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 OSTM1Q86WC4 334 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 CRYBG2Q8N1P7 616 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 TMEM199Q8N511 208 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 WDTC1Q8N5D0 677 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 IPO4Q8TEX9 1081 aaKnown RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 DSEQ9UL01 958 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 KIF4AO95239 1232 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 TCEAL1Q15170 157 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 LIMS2Q7Z4I7 341 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 LRRC57Q8N9N7 239 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 B3GALNT2Q8NCR0 500 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 C18orf8Q96DM3 657 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 CAPZA3Q96KX2 299 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 LPIN3Q9BQK8 851 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 MED10Q9BTT4 135 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 MRPL9Q9BYD2 267 aaKnown RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 SNX12Q9UMY4 172 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 PRG3Q9Y2Y8 225 aaPredicted RBP18.35■□□□□ 0.53
CLDN4-201ENST00000340958 NME7Q9Y5B8 376 aa18.35■□□□□ 0.53
CLDN4-201ENST00000340958 TDRD15B5MCY1 1934 aaKnown RBP18.34■□□□□ 0.53
CLDN4-201ENST00000340958 SZT2Q5T011 3432 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 MYO1FO00160 1098 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 TADA2AO75478 443 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 CCDC130P13994 396 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 TCP1P17987 556 aaKnown RBP18.34■□□□□ 0.53
CLDN4-201ENST00000340958 GATMP50440 423 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 HADHBP55084 474 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms