RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GPC5P78333 572 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 DLG4P78352 724 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 ADAM9Q13443 819 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 NCOA4Q13772 614 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 MAPRE1Q15691 268 aaKnown RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 EDRF1Q3B7T1 1238 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 ZNF658Q5TYW1 1059 aaPredicted RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 ASTLQ6HA08 431 aaPredicted RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 TANGO2Q6ICL3 276 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 SPATA2LQ8IUW3 424 aaPredicted RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 SPATA20Q8TB22 786 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 GIPC2Q8TF65 315 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 SMARCD2Q92925 531 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 FUBP3Q96I24 572 aaKnown RBP eCLIP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 ZSWIM3Q96MP5 696 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 PRRX2Q99811 253 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 VRTNQ9H8Y1 702 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 ZNF334Q9HCZ1 680 aaPredicted RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 ZNF318Q5VUA4 2279 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 MYBPHLA2RUH7 354 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 HCRTO43612 131 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 AKAP3O75969 853 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 CLSTN1O94985 981 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 PSMC2P35998 433 aaKnown RBP29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 GNL1P36915 607 aaPredicted RBP29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 CLCN5P51795 746 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 VAMP7P51809 220 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 RPL10AP62906 217 aaKnown RBP29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 CFAP221Q4G0U5 840 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 ZCWPW2Q504Y3 356 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 FAM171BQ6P995 826 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 C4orf50Q6ZRC1 276 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 INTS8Q75QN2 995 aaKnown RBP29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 FLCNQ8NFG4 579 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 MRPL45Q9BRJ2 306 aaKnown RBP29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 ATXN3LQ9H3M9 355 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 NXF1Q9UBU9 619 aaKnown RBP29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 CA14Q9ULX7 337 aa29.55■■■□□ 2.32
ATPAF1-201ENST00000329231 PDGFRBP09619 1106 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 KRT13P13646 458 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 GABRR2P28476 465 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 PFKPQ01813 784 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 ZNF699Q32M78 642 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 ZACNQ401N2 412 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 ARHGAP15Q53QZ3 475 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 COBLL1Q53SF7 1204 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 GAREM2Q75VX8 874 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 FAM186BQ8IYM0 893 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 OR6B3Q8NGW1 331 aa29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 ZSCAN18Q8TBC5 510 aaPredicted RBP29.54■■■□□ 2.32
ATPAF1-201ENST00000329231 KRBA1A5PL33 1030 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 ATP2C2O75185 946 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 FCARP24071 287 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 CYP2F1P24903 491 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 CDC25CP30307 473 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 PRCPP42785 496 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 PSMC1P62191 440 aaKnown RBP29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 ENPEPQ07075 957 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 ZNF667Q5HYK9 610 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 ERCC4Q92889 916 aaPredicted RBP29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 GCNAQ96QF7 691 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 PLA2G2FQ9BZM2 168 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 TRPV4Q9HBA0 871 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 ARHGEF3Q9NR81 526 aa29.53■■■□□ 2.32
ATPAF1-201ENST00000329231 VNN1O95497 513 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 CSH1P0DML2 217 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 CSH2P0DML3 217 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 NPR3P17342 541 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 RFX1P22670 979 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 NUBP1P53384 320 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 CCDC142Q17RM4 750 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 SGSM1Q2NKQ1 1148 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 IER5LQ5T953 404 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 SV2AQ7L0J3 742 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 CRTAC1Q9NQ79 661 aa29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 MAGEC2Q9UBF1 373 aaPredicted RBP29.52■■■□□ 2.32
ATPAF1-201ENST00000329231 STK25O00506 426 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 GADD45BO75293 160 aaPredicted RBP29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 MAGEA11P43364 429 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 GPR15P49685 360 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 C1orf220Q5T0J3 134 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 CWF19L1Q69YN2 538 aaKnown RBP29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 TAF4BQ92750 862 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 E2F7Q96AV8 911 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 IPO9Q96P70 1041 aaKnown RBP29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 TSG101Q99816 390 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 MKNK1Q9BUB5 465 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 IL21Q9HBE4 155 aa29.51■■■□□ 2.31
ATPAF1-201ENST00000329231 CETN3O15182 167 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 P4HA1P13674 534 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 DDR2Q16832 855 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 GPR158Q5T848 1215 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 TMEM105Q8N8V8 129 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 MYCBPAPQ8TBZ2 947 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 MYLPFQ96A32 169 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 FAM122AQ96E09 287 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 SHDQ96IW2 340 aa29.5■■■□□ 2.31
ATPAF1-201ENST00000329231 HMGA1P17096 107 aaKnown RBP29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 AOC1P19801 751 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 STXBP5Q5T5C0 1151 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms