RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 ATP5DP30049 168 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 MAP2K2P36507 400 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 CDH8P55286 799 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 PTPN20Q4JDL3 420 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 TFDP3Q5H9I0 405 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 JADE1Q6IE81 842 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 DRICH1Q6PGQ1 229 aaPredicted RBP16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 SLC10A4Q96EP9 437 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 SEC16BQ96JE7 1060 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 SDCBP2Q9H190 292 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 PDZD7Q9H5P4 517 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 ASB7Q9H672 318 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 VTA1Q9NP79 307 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 MGAMO43451 1857 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 LIASO43766 372 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 KRT3P12035 628 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 ATICP31939 592 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 PTPN7P35236 360 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 RAD23BP54727 409 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 TNFAIP8L3Q5GJ75 292 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 TXNRD3NBQ6F5E7 133 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 SPOCD1Q6ZMY3 1216 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 AFG1LQ8WV93 481 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 CPB2Q96IY4 423 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 SERPINB12Q96P63 405 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 FOXP3Q9BZS1 431 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 CYTH4Q9UIA0 394 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 ZNF148Q9UQR1 794 aa16.5■□□□□ 0.23
TSC22D3-201ENST00000315660 ITGB3P05106 788 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 CHN1P15882 459 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 PSMA2P25787 234 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 KLRC2P26717 231 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 GKAP1Q5VSY0 366 aaPredicted RBP16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 POLNQ7Z5Q5 900 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 GPATCH11Q8N954 259 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 OSBPL7Q9BZF2 842 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 ADAM7Q9H2U9 754 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 WDR35Q9P2L0 1181 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 TJP2Q9UDY2 1190 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 RBM47A0AV96 593 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 LRRD1A4D1F6 860 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 GOLGA8SH3BPF8 625 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 VTNP04004 478 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 ORC1Q13415 861 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 HADHQ16836 314 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 EAPPQ56P03 285 aaPredicted RBP16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 CPLX4Q7Z7G2 160 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 P3H4Q92791 437 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 CYP3A43Q9HB55 503 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 DNPEPQ9ULA0 475 aa16.49■□□□□ 0.23
TSC22D3-201ENST00000315660 hCG_1818297A0A087WSY0 165 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 KRT7P08729 469 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 ARF4P18085 180 aaPredicted RBP16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 RFC1P35251 1148 aaPredicted RBP16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 ADCYAP1R1P41586 468 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 PSMC1P62191 440 aaKnown RBP16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 KYNUQ16719 465 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 LONRF1Q17RB8 773 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 SLC10A6Q3KNW5 377 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 PRUNE1Q86TP1 453 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 SLC4A11Q8NBS3 891 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 FNIP1Q8TF40 1166 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.235e-8■■■■■ 31.3
TSC22D3-201ENST00000315660 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 ACSF2Q96CM8 615 aaPredicted RBP16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 CHMP6Q96FZ7 201 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 PWWP2AQ96N64 755 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 CD248Q9HCU0 757 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 HMGXB4Q9UGU5 601 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 COL1A2P08123 1366 aa16.48■□□□□ 0.23
TSC22D3-201ENST00000315660 NDC80O14777 642 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 P3H1Q32P28 736 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 RELL1Q8IUW5 271 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 NLRP7Q8WX94 980 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 TMEM176AQ96HP8 235 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 CCDC77Q9BR77 488 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 ELOVL4Q9GZR5 314 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 KATNBL1Q9H079 304 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 VRTNQ9H8Y1 702 aa16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
TSC22D3-201ENST00000315660 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms