RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TALDO1P37837 337 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 CAMK2GQ13555 558 aaPredicted RBP12.55□□□□□ -0.4
PCF11-201ENST00000298281 GLMNQ92990 594 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 STK33Q9BYT3 514 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 SERHL2Q9H4I8 314 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 SERHLQ9NQF3 203 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 PPP2R3BQ9Y5P8 575 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 SAC3D1A6NKF1 404 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 PDXKO00764 312 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 SCP2P22307 547 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 PLOD1Q02809 727 aaPredicted RBP12.55□□□□□ -0.4
PCF11-201ENST00000298281 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
PCF11-201ENST00000298281 PDIA5Q14554 519 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 LRRC36Q1X8D7 754 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 MIER2Q8N344 545 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 C18orf8Q96DM3 657 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 RNFT2Q96EX2 444 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 AIFM3Q96NN9 605 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 KCND2Q9NZV8 630 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 F5H6K3 240 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 CLASP2O75122 1294 aaKnown RBP12.55□□□□□ -0.4
PCF11-201ENST00000298281 KLRC3Q07444 240 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 PUDPQ08623 228 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 HIC1Q14526 733 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 IZUMO3Q5VZ72 239 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 ATP6V1G3Q96LB4 118 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 POTECB2RU33 542 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 LRG1P02750 347 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 ETNK1Q9HBU6 452 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 MINPP1Q9UNW1 487 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L15C9J2P7 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L13C9JLJ4 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L11C9JVI0 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L18D6R9N7 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L22D6RA61 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L17D6RBQ6 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L19D6RCP7 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L20D6RJB6 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
PCF11-201ENST00000298281 C21orf2O43822 256 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 SPAG6O75602 509 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L24Q0WX57 530 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 PCYOX1LQ8NBM8 494 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 WDR60Q8WVS4 1066 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
PCF11-201ENST00000298281 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 C4orf22Q6V702 233 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 CMTM5Q96DZ9 223 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 FANCEQ9HB96 536 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 EYA4O95677 639 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 SNX17Q15036 470 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 KLHL17Q6TDP4 642 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 CCDC185Q8N715 623 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 TRIM63Q969Q1 353 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 COPG2Q9UBF2 871 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 SNX8Q9Y5X2 465 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 PDZK1P1A8MUH7 402 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 ADCY6O43306 1168 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 CCNB2O95067 398 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 ECDO95905 644 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 ERFP50548 548 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 GTF3C2Q8WUA4 911 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 EIF2AK1Q9BQI3 630 aaKnown RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 ECE2O60344 883 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 BCAP31P51572 246 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 ARSEP51690 589 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 NDUFA5Q16718 116 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 OLFML2AQ68BL7 652 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 EFL1Q7Z2Z2 1120 aaKnown RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 MICU2Q8IYU8 434 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 RSPH9Q9H1X1 276 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 OSGEPL1Q9H4B0 414 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 MBD2Q9UBB5 411 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 GGCXP38435 758 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 RBP5P82980 135 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 CCNIQ14094 377 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 AASDHQ4L235 1098 aaPredicted RBP12.54□□□□□ -0.4
PCF11-201ENST00000298281 KIAA0408Q6ZU52 694 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 ECSITQ9BQ95 431 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
PCF11-201ENST00000298281 PCNAP12004 261 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms