RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Kansl3A2RSY1 903 aaKnown RBP5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Skint11A7XV14 364 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Gm5930D3Z257 264 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Muc3E9PWP7 378 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Mroh4G3X8W1 983 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Usp17ldG5E8G2 545 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Usp17lcG5E8I7 545 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 CidebO70303 219 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Itm2bO89051 266 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 PcnaP17918 261 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 TecP24604 630 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Atxn10P28658 475 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Ptger1P35375 405 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Tuba4aP68368 448 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Kifap3P70188 793 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Stim1P70302 685 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Atp8a2P98200 1148 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Rac2Q05144 192 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 CrtamQ149L7 389 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Hhla1Q3TYV2 514 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Arhgap17Q3UIA2 846 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Usp30Q3UN04 517 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Gcnt7Q3V3K7 433 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Kctd1Q5M956 257 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 MycbpapQ5SUV2 932 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 PapolaQ61183 739 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Runx1t1Q61909 577 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Fstl1Q62356 306 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Smarca1Q6PGB8 1046 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Cspg5Q71M36 566 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Ddhd2Q80Y98 699 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Fbxo30Q8BJL1 746 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 UnkQ8BL48 810 aaKnown RBP5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Bri3bpQ8BXV2 253 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Saysd1Q8K190 188 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Q8R1Y2 203 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Pcdh18Q8VHR0 1134 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Prpf6Q91YR7 941 aaKnown RBP5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Cabp7Q91ZM8 215 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Tmem53Q9D0Z3 276 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 Tacc2Q9JJG0 1149 aa5.47□□□□□ -1.53
Clk1-201ENSMUST00000034868 VirmaA2AIV2 1811 aaKnown RBP5.46□□□□□ -1.53
Clk1-201ENSMUST00000034868 Sipa1l1Q8C0T5 1782 aa5.46□□□□□ -1.53
Clk1-201ENSMUST00000034868 Ehbp1l1Q99MS7 1716 aa5.46□□□□□ -1.53
Clk1-201ENSMUST00000034868 Robo1O89026 1612 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Tbc1d25A1A5B6 742 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 CercamA3KGW5 592 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Tnfrsf25B1AWN9 411 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Ptrhd1D3Z4S3 140 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Oog1E9Q5G7 496 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 AK157302I3ITR1 129 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Gm3383J3QQ59 259 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 EsrraO08580 422 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Mdm4O35618 489 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Myl3P09542 204 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Dnmt3cP0DOY1 709 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 ZfaP23607 742 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Hoxd9P28357 339 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Slc6a11P31650 627 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Meox1P32442 253 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Rab12P35283 243 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Grin1P35438 938 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 PuraP42669 321 aaKnown RBP5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Gnat2P50149 354 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Mxi1P50540 228 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Foxp2P58463 714 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Tuba1cP68373 449 aaKnown RBP5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Slc8a1P70414 970 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Atp5iQ06185 71 aaKnown RBP5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Cnnm3Q32NY4 713 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Echdc2Q3TLP5 296 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Tmem184cQ3TPR7 525 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Zfp51Q3U4L8 781 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Gramd2aQ3V3G7 320 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Trim67Q505D9 768 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Islr2Q5RKR3 745 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Krt12Q64291 487 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Zzz3Q6KAQ7 910 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Rcbtb1Q6NXM2 531 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Kiaa1328Q6NZK5 612 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Txndc15Q6P6J9 344 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 HltfQ6PCN7 1003 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Rxfp1Q6R6I7 758 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 R3hdm2Q80TM6 1044 aaKnown RBP5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Serpinb9fQ80UK5 377 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Trim36Q80WG7 729 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Dmrt3Q80WT2 476 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Ric8bQ80XE1 520 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 TufmQ8BFR5 452 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 DglucyQ8BH86 617 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Iars2Q8BIJ6 1012 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Mtrf1lQ8BJU9 373 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Cep85Q8BMK0 761 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Cep55Q8BT07 462 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 E330017A01RikQ8BU47 192 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Ccdc169Q8BXX9 214 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Camkk2Q8C078 588 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 CntrobQ8CB62 887 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Gm16223Q8CBM3 117 aa5.46□□□□□ -1.54
Clk1-201ENSMUST00000034868 Rbm28Q8CGC6 750 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms