Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm25239-201ENSMUST00000174915 86 ntBASIC39.17■■■■□ 3.86
Usp30Q3UN04 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Usp30Q3UN04 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Usp30Q3UN04 Gm15042-201ENSMUST00000120212 883 ntBASIC34.24■■■■□ 3.07
Usp30Q3UN04 Gm24109-201ENSMUST00000175489 103 ntBASIC33.94■■■■□ 3.02
Usp30Q3UN04 Gm15045-201ENSMUST00000117359 883 ntBASIC33.47■■■□□ 2.95
Usp30Q3UN04 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Usp30Q3UN04 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Usp30Q3UN04 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Usp30Q3UN04 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Usp30Q3UN04 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Usp30Q3UN04 Gm23366-201ENSMUST00000175022 89 ntBASIC32.76■■■□□ 2.83
Usp30Q3UN04 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Usp30Q3UN04 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
Usp30Q3UN04 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Usp30Q3UN04 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Usp30Q3UN04 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.64■■■□□ 2.66
Usp30Q3UN04 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Usp30Q3UN04 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.53■■■□□ 2.64
Usp30Q3UN04 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Usp30Q3UN04 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.41■■■□□ 2.62
Usp30Q3UN04 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Usp30Q3UN04 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
Usp30Q3UN04 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Usp30Q3UN04 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Usp30Q3UN04 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Usp30Q3UN04 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Usp30Q3UN04 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Usp30Q3UN04 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Usp30Q3UN04 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Usp30Q3UN04 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.97■■■□□ 2.55
Usp30Q3UN04 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.93■■■□□ 2.54
Usp30Q3UN04 Gm25238-201ENSMUST00000174914 89 ntBASIC30.92■■■□□ 2.54
Usp30Q3UN04 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Usp30Q3UN04 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Usp30Q3UN04 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Usp30Q3UN04 Psd-208ENSMUST00000224556 2034 ntBASIC30.56■■■□□ 2.48
Usp30Q3UN04 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
Usp30Q3UN04 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.33■■■□□ 2.45
Usp30Q3UN04 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Usp30Q3UN04 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.2■■■□□ 2.43
Usp30Q3UN04 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Usp30Q3UN04 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.05■■■□□ 2.4
Usp30Q3UN04 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
Usp30Q3UN04 Gm27325-201ENSMUST00000175467 74 ntBASIC30.01■■■□□ 2.39
Usp30Q3UN04 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Usp30Q3UN04 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Usp30Q3UN04 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Usp30Q3UN04 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.84■■■□□ 2.37
Usp30Q3UN04 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.82■■■□□ 2.36
Usp30Q3UN04 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Usp30Q3UN04 Gm25262-201ENSMUST00000174934 133 ntBASIC29.67■■■□□ 2.34
Usp30Q3UN04 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Usp30Q3UN04 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.54■■■□□ 2.32
Usp30Q3UN04 Rab21-202ENSMUST00000218831 843 ntBASIC29.5■■■□□ 2.31
Usp30Q3UN04 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Usp30Q3UN04 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.48■■■□□ 2.31
Usp30Q3UN04 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Usp30Q3UN04 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Usp30Q3UN04 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.4■■■□□ 2.3
Usp30Q3UN04 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Usp30Q3UN04 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Usp30Q3UN04 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.26■■■□□ 2.27
Usp30Q3UN04 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Usp30Q3UN04 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.24■■■□□ 2.27
Usp30Q3UN04 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Usp30Q3UN04 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.12■■■□□ 2.25
Usp30Q3UN04 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
Usp30Q3UN04 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.08■■■□□ 2.25
Usp30Q3UN04 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Usp30Q3UN04 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Usp30Q3UN04 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Usp30Q3UN04 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Usp30Q3UN04 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Usp30Q3UN04 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Usp30Q3UN04 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.01■■■□□ 2.23
Usp30Q3UN04 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Usp30Q3UN04 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Usp30Q3UN04 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Usp30Q3UN04 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp30Q3UN04 Gm26115-201ENSMUST00000175605 87 ntBASIC28.94■■■□□ 2.22
Usp30Q3UN04 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp30Q3UN04 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Usp30Q3UN04 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Usp30Q3UN04 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.85■■■□□ 2.21
Usp30Q3UN04 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Usp30Q3UN04 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Usp30Q3UN04 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Usp30Q3UN04 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.75■■■□□ 2.19
Usp30Q3UN04 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Usp30Q3UN04 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.74■■■□□ 2.19
Usp30Q3UN04 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Usp30Q3UN04 Gm8109-201ENSMUST00000194076 746 ntBASIC28.73■■■□□ 2.19
Usp30Q3UN04 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp30Q3UN04 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Usp30Q3UN04 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Usp30Q3UN04 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.6■■■□□ 2.17
Usp30Q3UN04 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.6■■■□□ 2.17
Usp30Q3UN04 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Usp30Q3UN04 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms