RNA–Protein interactions for RNA: YOR327C

SNC2, Transcript of Vesicle membrane receptor protein (v-SNARE), yeast

Gene SNC2, Length 348 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNC2	YOR327C	YEL073C	P39974	107 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	YEL067C	P39978	195 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	CCS1	P40202	249 aa	Known RBP	0.96	□□□□□ -2.26
SNC2	YOR327C	PAC10	P48363	199 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	ORM1	P53224	222 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	MAK3	Q03503	176 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	COA3	Q3E7B2	85 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	TRM3	Q07527	1436 aa		0.96	□□□□□ -2.26
SNC2	YOR327C	DUR1,2	P32528	1835 aa	Known RBP	0.95	□□□□□ -2.26
SNC2	YOR327C	VAR1	P02381	398 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	RPS28B	P0C0X0	67 aa	Known RBP	0.95	□□□□□ -2.26
SNC2	YOR327C	YBL010C	P32788	280 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	PTC1	P35182	281 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.95	□□□□□ -2.26	not detected
SNC2	YOR327C	ETR1	P38071	380 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	DER1	P38307	211 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	SLM6	P38343	150 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	SOK1	P40317	901 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	LSM3	P57743	89 aa	Known RBP	0.95	□□□□□ -2.26
SNC2	YOR327C	MET31	Q03081	177 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	YPR202W	Q08993	238 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	NSL1	Q12143	216 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	YMR030W-A	Q3E760	96 aa		0.95	□□□□□ -2.26
SNC2	YOR327C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.95	□□□□□ -2.26
SNC2	YOR327C	ATP5	P09457	212 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	UBC6	P33296	250 aa	Predicted RBP	0.94	□□□□□ -2.26
SNC2	YOR327C	MOB1	P40484	314 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	NQM1	P53228	333 aa	Predicted RBP	0.94	□□□□□ -2.26
SNC2	YOR327C	YDR476C	Q03362	224 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	LIP1	Q03579	150 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	YLR046C	Q12253	270 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	TAR1	Q8TGM6	124 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	TAF2	P23255	1407 aa		0.94	□□□□□ -2.26
SNC2	YOR327C	FIG1	P38224	298 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	POP7	P38291	140 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	DLS1	P40366	167 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	CCC1	P47818	322 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	SBH2	P52871	88 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	YML079W	Q03629	201 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	HRD1	Q08109	551 aa		0.93	□□□□□ -2.26
SNC2	YOR327C	EFG1	Q3E705	233 aa	Known RBP	0.93	□□□□□ -2.26
SNC2	YOR327C	SLH1	P53327	1967 aa	Known RBP	0.92	□□□□□ -2.26
SNC2	YOR327C	SPS2	P08459	502 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	RPL30	P14120	105 aa	Known RBP	0.92	□□□□□ -2.26
SNC2	YOR327C	PEX34	P25584	144 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	BUB2	P26448	306 aa	Predicted RBP	0.92	□□□□□ -2.26
SNC2	YOR327C	RPC19	P28000	142 aa	Known RBP	0.92	□□□□□ -2.26
SNC2	YOR327C	HTD2	P38790	280 aa	Known RBP	0.92	□□□□□ -2.26
SNC2	YOR327C	APQ12	P40532	138 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	FIP1	P45976	327 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	HHT1	P61830	136 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	YDR102C	Q03864	110 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	YDR391C	Q04170	232 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	YPR114W	Q06107	315 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	YDL241W	Q07738	123 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	ATG10	Q07879	167 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	UIP4	Q08926	304 aa		0.92	□□□□□ -2.26
SNC2	YOR327C	INO4	P13902	151 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	UBC8	P28263	218 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	SRP102	P36057	244 aa	Predicted RBP	0.91	□□□□□ -2.26
SNC2	YOR327C	MRPL15	P36523	253 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	YBR242W	P38331	238 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	YPT31	P38555	223 aa	Known RBP	0.91	□□□□□ -2.26
SNC2	YOR327C	YGR269W	P40326	108 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	YNR064C	P53750	290 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	AVO2	Q04749	426 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	YDL157C	Q12082	118 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	ATP14	Q12349	124 aa		0.91	□□□□□ -2.26
SNC2	YOR327C	PBI2	P0CT04	75 aa	Known RBP	0.9	□□□□□ -2.27
SNC2	YOR327C	LSM1	P47017	172 aa	Known RBP	0.9	□□□□□ -2.27
SNC2	YOR327C	YGL193C	P53097	103 aa		0.9	□□□□□ -2.27
SNC2	YOR327C	SPC2	Q04969	178 aa		0.9	□□□□□ -2.27
SNC2	YOR327C	YPD1	Q07688	167 aa		0.9	□□□□□ -2.27
SNC2	YOR327C	YPR203W	Q08994	102 aa		0.9	□□□□□ -2.27
SNC2	YOR327C	PET20	Q99373	253 aa		0.9	□□□□□ -2.27
SNC2	YOR327C	RIF1	P29539	1916 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	CDC39	P25655	2108 aa	Known RBP	0.89	□□□□□ -2.27
SNC2	YOR327C	RPS25B	P0C0T4	108 aa	Known RBP	0.89	□□□□□ -2.27
SNC2	YOR327C	MRS4	P23500	304 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	AHT1	P29589	182 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	YER181C	P40097	107 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	CIN5	P40917	295 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	MOG1	P47123	218 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	PKR1	Q03880	122 aa	Known RBP	0.89	□□□□□ -2.27
SNC2	YOR327C	FIT1	Q04433	528 aa		0.89	□□□□□ -2.27
SNC2	YOR327C	RPS25A	Q3E792	108 aa	Predicted RBP	0.89	□□□□□ -2.27
SNC2	YOR327C	UBR1	P19812	1950 aa		0.88	□□□□□ -2.27
SNC2	YOR327C	SHB17	P36136	271 aa	Known RBP	0.88	□□□□□ -2.27
SNC2	YOR327C	YHL037C	P38733	133 aa		0.88	□□□□□ -2.27
SNC2	YOR327C	YAP3	P38749	330 aa		0.88	□□□□□ -2.27
SNC2	YOR327C	GIM4	P40005	111 aa	Known RBP	0.88	□□□□□ -2.27
SNC2	YOR327C	HUA1	P40325	198 aa		0.88	□□□□□ -2.27
SNC2	YOR327C	YJL218W	P40892	196 aa	Known RBP	0.88	□□□□□ -2.27
SNC2	YOR327C	YGR042W	P53227	271 aa		0.88	□□□□□ -2.27
SNC2	YOR327C	RAV2	Q03956	351 aa		0.88	□□□□□ -2.27
SNC2	YOR327C	ADE6	P38972	1358 aa	Known RBP	0.87	□□□□□ -2.27
SNC2	YOR327C	SPT14	P32363	452 aa		0.87	□□□□□ -2.27
SNC2	YOR327C	MRPL24	P36525	258 aa	Predicted RBP	0.87	□□□□□ -2.27
SNC2	YOR327C	YFL051C	P43552	160 aa		0.87	□□□□□ -2.27
SNC2	YOR327C	RBL2	P48606	106 aa	Known RBP	0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms