RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	OCH1	P31755	480 aa		3.13	□□□□□ -1.91
UBP10	YNL186W	GLC8	P41818	229 aa		3.13	□□□□□ -1.91
UBP10	YNL186W	PFS2	P42841	465 aa	Known RBP	3.13	□□□□□ -1.91
UBP10	YNL186W	BUD13	P46947	266 aa	Predicted RBP	3.13	□□□□□ -1.91
UBP10	YNL186W	UBC7	Q02159	165 aa		3.13	□□□□□ -1.91
UBP10	YNL186W	MRPS16	Q02608	121 aa		3.13	□□□□□ -1.91
UBP10	YNL186W	FCF1	Q05498	189 aa	Predicted RBP	3.13	□□□□□ -1.91
UBP10	YNL186W	AKR2	Q12013	749 aa		3.13	□□□□□ -1.91
UBP10	YNL186W	YPR014C	Q6B0W2	109 aa		3.13	□□□□□ -1.91
UBP10	YNL186W	RPL30	P14120	105 aa	Known RBP	3.12	□□□□□ -1.91
UBP10	YNL186W	BET1	P22804	142 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	ECM34	P38728	170 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	TIM13	P53299	105 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	ATG39	Q06159	398 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	OCA6	Q12454	224 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	ADH1	P00330	348 aa	Known RBP	3.12	□□□□□ -1.91
UBP10	YNL186W	CDC8	P00572	216 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	STP22	P25604	385 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	SUA7	P29055	345 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP10	YNL186W	COS8	P38723	381 aa		3.12	□□□□□ -1.91
UBP10	YNL186W	SMD1	Q02260	146 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP10	YNL186W	YAR068W	P39564	161 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	PHB1	P40961	287 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	SER2	P42941	309 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	CAB4	P53332	305 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	NAT3	Q06504	195 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	RPL9A	P05738	191 aa	Known RBP	3.11	□□□□□ -1.91
UBP10	YNL186W	CPA1	P07258	411 aa	Known RBP	3.11	□□□□□ -1.91
UBP10	YNL186W	CPR5	P35176	225 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	CTR2	P38865	189 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	DLS1	P40366	167 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	RPL9B	P51401	191 aa	Known RBP	3.11	□□□□□ -1.91
UBP10	YNL186W	EMC4	P53073	190 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	HHT1	P61830	136 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	YPD1	Q07688	167 aa		3.11	□□□□□ -1.91
UBP10	YNL186W	URA5	P13298	226 aa	Known RBP	3.1	□□□□□ -1.91
UBP10	YNL186W	RPS1A	P33442	255 aa	Known RBP	3.1	□□□□□ -1.91
UBP10	YNL186W	YNL200C	P40165	246 aa	Known RBP	3.1	□□□□□ -1.91
UBP10	YNL186W	YIL086C	P40503	102 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	YFL019C	P43576	117 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	CIS3	P47001	227 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	FMN1	Q03778	218 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	TRS20	P38334	175 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	YPI1	P43587	155 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	YOL014W	Q08110	124 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	YML100W-A	Q8TGT0	57 aa		3.1	□□□□□ -1.91
UBP10	YNL186W	SKG1	P36169	355 aa		3.09	□□□□□ -1.91
UBP10	YNL186W	NSG1	P38837	291 aa		3.09	□□□□□ -1.91
UBP10	YNL186W	YER137C	P40083	148 aa	Known RBP	3.09	□□□□□ -1.91
UBP10	YNL186W	YPL073C	P40323	161 aa		3.09	□□□□□ -1.91
UBP10	YNL186W	SMD3	P43321	101 aa	Known RBP	3.09	□□□□□ -1.91
UBP10	YNL186W	FIP1	P45976	327 aa		3.09	□□□□□ -1.91
UBP10	YNL186W	ATO3	Q12359	275 aa		3.09	□□□□□ -1.91
UBP10	YNL186W	YHR125W	P38831	101 aa		3.09	□□□□□ -1.92
UBP10	YNL186W	VTC1	P40046	129 aa	RIP-Chip data	3.09	□□□□□ -1.92	not detected
UBP10	YNL186W	YFR054C	P43622	192 aa		3.09	□□□□□ -1.92
UBP10	YNL186W	XPT1	P47165	209 aa		3.09	□□□□□ -1.92
UBP10	YNL186W	YGL260W	P53056	76 aa		3.09	□□□□□ -1.92
UBP10	YNL186W	RSM27	P53305	110 aa		3.09	□□□□□ -1.92
UBP10	YNL186W	Q0144	Q9ZZW2	109 aa		3.09	□□□□□ -1.92
UBP10	YNL186W	GPA2	P10823	449 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	OST2	P46964	130 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	TAD3	Q9URQ3	322 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	CCA1	P21269	546 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	ALG9	P53868	555 aa	Known RBP	3.08	□□□□□ -1.92
UBP10	YNL186W	COF1	Q03048	143 aa	Known RBP	3.08	□□□□□ -1.92
UBP10	YNL186W	NEJ1	Q06148	342 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	PIN3	Q06449	215 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	ATG10	Q07879	167 aa		3.08	□□□□□ -1.92
UBP10	YNL186W	UBR1	P19812	1950 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	ADH3	P07246	375 aa	Known RBP	3.07	□□□□□ -1.92
UBP10	YNL186W	CBP6	P07253	162 aa	Predicted RBP	3.07	□□□□□ -1.92
UBP10	YNL186W	NSP1	P14907	823 aa	Known RBP	3.07	□□□□□ -1.92
UBP10	YNL186W	MEP2	P41948	499 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	YFR045W	P43617	309 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	CCC1	P47818	322 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	FYV4	P38783	130 aa	Predicted RBP	3.07	□□□□□ -1.92
UBP10	YNL186W	GLR1	P41921	483 aa	Known RBP	3.07	□□□□□ -1.92
UBP10	YNL186W	YFL012W	P43580	148 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	FRQ1	Q06389	190 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	YLR412C-A	Q3E742	68 aa		3.07	□□□□□ -1.92
UBP10	YNL186W	TIM9	O74700	87 aa		3.06	□□□□□ -1.92
UBP10	YNL186W	AIM2	P39721	246 aa		3.06	□□□□□ -1.92
UBP10	YNL186W	ARC15	P40518	154 aa	RIP-Chip data	3.06	□□□□□ -1.92	not detected
UBP10	YNL186W	YOR268C	Q08734	132 aa		3.06	□□□□□ -1.92
UBP10	YNL186W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
UBP10	YNL186W	YCR099C	P25657	155 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	UGX2	P32772	223 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	MRPL17	P36528	281 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	ETR1	P38071	380 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	PRE5	P40302	234 aa	Known RBP	3.05	□□□□□ -1.92
UBP10	YNL186W	YGR219W	P53307	113 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	IGO1	P53897	168 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	DIG2	Q03373	323 aa	Known RBP	3.05	□□□□□ -1.92
UBP10	YNL186W	YAR023C	D6VPM8	179 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	ATP5	P09457	212 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	YPT53	P36019	220 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	SMX2	P40204	77 aa	Known RBP	3.05	□□□□□ -1.92
UBP10	YNL186W	CUP9	P41817	306 aa		3.05	□□□□□ -1.92
UBP10	YNL186W	YDR274C	P87283	123 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms