RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C YGR050CP53231 118 aa0.58□□□□□ -2.32
RKR1YMR247C CYT2Q00873 224 aa0.58□□□□□ -2.32
RKR1YMR247C YML079WQ03629 201 aa0.58□□□□□ -2.32
RKR1YMR247C RPL27AP0C2H6 136 aaKnown RBP0.57□□□□□ -2.32
RKR1YMR247C RPL27BP0C2H7 136 aaKnown RBP0.57□□□□□ -2.32
RKR1YMR247C OCH1P31755 480 aa0.57□□□□□ -2.32
RKR1YMR247C NSG1P38837 291 aa0.57□□□□□ -2.32
RKR1YMR247C PDS1P40316 373 aaPredicted RBP0.57□□□□□ -2.32
RKR1YMR247C YIL102CP40488 101 aa0.57□□□□□ -2.32
RKR1YMR247C YJR111CP47148 283 aaKnown RBP0.57□□□□□ -2.32
RKR1YMR247C PGA1P53896 198 aa0.57□□□□□ -2.32
RKR1YMR247C GAS3Q03655 524 aa0.57□□□□□ -2.32
RKR1YMR247C SPC2Q04969 178 aa0.57□□□□□ -2.32
RKR1YMR247C YPR127WQ06494 345 aa0.57□□□□□ -2.32
RKR1YMR247C TVP23P38962 199 aa0.57□□□□□ -2.32
RKR1YMR247C GLE2P40066 365 aa0.57□□□□□ -2.32
RKR1YMR247C YJR146WP47174 117 aa0.57□□□□□ -2.32
RKR1YMR247C VPS71Q03433 280 aa0.57□□□□□ -2.32
RKR1YMR247C EMI1Q04406 187 aa0.57□□□□□ -2.32
RKR1YMR247C YLR050CQ12155 161 aaKnown RBP0.57□□□□□ -2.32
RKR1YMR247C ADF1Q2V2Q1 113 aa0.57□□□□□ -2.32
RKR1YMR247C FLO9P39712 1322 aa0.57□□□□□ -2.32
RKR1YMR247C FMP49A0A023PZB3 126 aa0.57□□□□□ -2.32
RKR1YMR247C SPS100P13130 326 aa0.57□□□□□ -2.32
RKR1YMR247C NTF2P33331 125 aaKnown RBP0.57□□□□□ -2.32
RKR1YMR247C PTC1P35182 281 aa0.57□□□□□ -2.32
RKR1YMR247C GAA1P39012 614 aa0.57□□□□□ -2.32
RKR1YMR247C HYR1P40581 163 aaKnown RBP0.57□□□□□ -2.32
RKR1YMR247C GLC8P41818 229 aa0.57□□□□□ -2.32
RKR1YMR247C YGR201CP42936 225 aa0.57□□□□□ -2.32
RKR1YMR247C YFL065CP43539 102 aa0.57□□□□□ -2.32
RKR1YMR247C SSU72P53538 206 aaPredicted RBP0.57□□□□□ -2.32
RKR1YMR247C SNO1Q03144 224 aa0.57□□□□□ -2.32
RKR1YMR247C YDR476CQ03362 224 aa0.57□□□□□ -2.32
RKR1YMR247C YLR162WQ06235 118 aa0.57□□□□□ -2.32
RKR1YMR247C YOL019WQ08157 551 aa0.57□□□□□ -2.32
RKR1YMR247C GET4Q12125 312 aa0.57□□□□□ -2.32
RKR1YMR247C YNL146C-AQ3E7Z1 64 aa0.57□□□□□ -2.32
RKR1YMR247C HAP2P06774 265 aa0.56□□□□□ -2.32
RKR1YMR247C HAP3P13434 144 aa0.56□□□□□ -2.32
RKR1YMR247C YBR242WP38331 238 aa0.56□□□□□ -2.32
RKR1YMR247C YPT31P38555 223 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C FCY21P40039 528 aa0.56□□□□□ -2.32
RKR1YMR247C MET31Q03081 177 aa0.56□□□□□ -2.32
RKR1YMR247C GRX8Q05926 109 aa0.56□□□□□ -2.32
RKR1YMR247C NAT3Q06504 195 aa0.56□□□□□ -2.32
RKR1YMR247C YOL160WQ08321 113 aa0.56□□□□□ -2.32
RKR1YMR247C PRM3Q08931 133 aa0.56□□□□□ -2.32
RKR1YMR247C DAS2Q12084 232 aa0.56□□□□□ -2.32
RKR1YMR247C YOR342CQ12182 319 aa0.56□□□□□ -2.32
RKR1YMR247C YIR021W-AQ3E739 70 aa0.56□□□□□ -2.32
RKR1YMR247C YBR056W-AI2HB52 66 aa0.56□□□□□ -2.32
RKR1YMR247C THP2O13539 261 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C CDC28P00546 298 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C YCR023CP25351 611 aa0.56□□□□□ -2.32
RKR1YMR247C PEX34P25584 144 aa0.56□□□□□ -2.32
RKR1YMR247C LHP1P33399 275 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C YER084WP40057 128 aa0.56□□□□□ -2.32
RKR1YMR247C DAN1P47178 298 aa0.56□□□□□ -2.32
RKR1YMR247C YGL230CP53074 147 aa0.56□□□□□ -2.32
RKR1YMR247C RRT8Q08219 342 aa0.56□□□□□ -2.32
RKR1YMR247C RTR2Q12378 196 aa0.56□□□□□ -2.32
RKR1YMR247C PET20Q99373 253 aa0.56□□□□□ -2.32
RKR1YMR247C PDR18P53756 1333 aa0.56□□□□□ -2.32
RKR1YMR247C PBI2P0CT04 75 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C YMR31P19955 123 aa0.56□□□□□ -2.32
RKR1YMR247C STP22P25604 385 aa0.56□□□□□ -2.32
RKR1YMR247C ATP7P30902 174 aa0.56□□□□□ -2.32
RKR1YMR247C MRPL15P36523 253 aa0.56□□□□□ -2.32
RKR1YMR247C LSM4P40070 187 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C YNL194CP40169 301 aa0.56□□□□□ -2.32
RKR1YMR247C CCS1P40202 249 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C ERG10P41338 398 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C MAK3Q03503 176 aa0.56□□□□□ -2.32
RKR1YMR247C RNH202Q05635 350 aa0.56□□□□□ -2.32
RKR1YMR247C YLR053CQ12026 108 aa0.56□□□□□ -2.32
RKR1YMR247C MCP1Q12106 302 aa0.56□□□□□ -2.32
RKR1YMR247C SLH1P53327 1967 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C YLR236CA0A023PZG4 107 aa0.56□□□□□ -2.32
RKR1YMR247C RPS25BP0C0T4 108 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C FUN14P18411 198 aa0.56□□□□□ -2.32
RKR1YMR247C BUB2P26448 306 aaPredicted RBP0.56□□□□□ -2.32
RKR1YMR247C ARC19P33204 171 aaKnown RBP0.56□□□□□ -2.32
RKR1YMR247C RPB7P34087 171 aa0.56□□□□□ -2.32
RKR1YMR247C CPR5P35176 225 aa0.56□□□□□ -2.32
RKR1YMR247C FIG1P38224 298 aa0.56□□□□□ -2.32
RKR1YMR247C CUP9P41817 306 aa0.56□□□□□ -2.32
RKR1YMR247C YJR015WP47090 510 aa0.56□□□□□ -2.32
RKR1YMR247C HHO1P53551 258 aa0.56□□□□□ -2.32
RKR1YMR247C AIM34Q03673 198 aa0.56□□□□□ -2.32
RKR1YMR247C PRP11Q07350 266 aaPredicted RBP0.56□□□□□ -2.32
RKR1YMR247C YLR126CQ12288 251 aa0.56□□□□□ -2.32
RKR1YMR247C RPS25AQ3E792 108 aaPredicted RBP0.56□□□□□ -2.32
RKR1YMR247C CMD1P06787 147 aaKnown RBP0.55□□□□□ -2.32
RKR1YMR247C YLR156WP0CE96 114 aa0.55□□□□□ -2.32
RKR1YMR247C YLR159WP0CE97 114 aa0.55□□□□□ -2.32
RKR1YMR247C YLR161WP0CE98 114 aa0.55□□□□□ -2.32
RKR1YMR247C NHP6AP11632 93 aaKnown RBP0.55□□□□□ -2.32
RKR1YMR247C TCP1P12612 559 aaKnown RBP0.55□□□□□ -2.32
RKR1YMR247C TRR1P29509 319 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms