RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C PKR1Q03880 122 aaKnown RBP3.73□□□□□ -1.81
NMD4YLR363C ELP6Q04868 273 aa3.73□□□□□ -1.81
NMD4YLR363C BER1Q06688 274 aaKnown RBP3.73□□□□□ -1.81
NMD4YLR363C CSI2Q08054 341 aa3.73□□□□□ -1.81
NMD4YLR363C PEX27Q08580 376 aa3.73□□□□□ -1.81
NMD4YLR363C PRM4Q12498 284 aa3.73□□□□□ -1.81
NMD4YLR363C YPR145C-AQ2V2P0 78 aa3.73□□□□□ -1.81
NMD4YLR363C YLR361C-AQ3E795 98 aa3.73□□□□□ -1.81
NMD4YLR363C MEK1P24719 497 aaPredicted RBP3.72□□□□□ -1.81
NMD4YLR363C MSK1P32048 576 aa3.72□□□□□ -1.81
NMD4YLR363C MRPL28P36527 147 aa3.72□□□□□ -1.81
NMD4YLR363C SDH4P37298 181 aa3.72□□□□□ -1.81
NMD4YLR363C YBR063CP38083 404 aa3.72□□□□□ -1.81
NMD4YLR363C SMB1P40018 196 aaKnown RBP3.72□□□□□ -1.81
NMD4YLR363C RRG9P40156 214 aa3.72□□□□□ -1.81
NMD4YLR363C FLX1P40464 311 aa3.72□□□□□ -1.81
NMD4YLR363C IGD1P43598 195 aa3.72□□□□□ -1.81
NMD4YLR363C MCM22P47167 239 aa3.72□□□□□ -1.81
NMD4YLR363C YML018CQ03730 393 aa3.72□□□□□ -1.81
NMD4YLR363C SDH7Q04401 133 aa3.72□□□□□ -1.81
NMD4YLR363C SEN15Q04675 128 aa3.72□□□□□ -1.81
NMD4YLR363C MRX8Q05473 314 aa3.72□□□□□ -1.81
NMD4YLR363C PRP11Q07350 266 aaPredicted RBP3.72□□□□□ -1.81
NMD4YLR363C FRE8Q12209 686 aa3.72□□□□□ -1.81
NMD4YLR363C ATG5Q12380 294 aa3.72□□□□□ -1.81
NMD4YLR363C PCL9Q12477 304 aa3.72□□□□□ -1.81
NMD4YLR363C TDH3P00359 332 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
NMD4YLR363C ADH3P07246 375 aaKnown RBP3.71□□□□□ -1.82
NMD4YLR363C NHP6BP11633 99 aaKnown RBP3.71□□□□□ -1.82
NMD4YLR363C MAG1P22134 296 aaKnown RBP3.71□□□□□ -1.82
NMD4YLR363C UBC8P28263 218 aa3.71□□□□□ -1.82
NMD4YLR363C TIR2P33890 251 aa3.71□□□□□ -1.82
NMD4YLR363C YKL102CP34249 101 aa3.71□□□□□ -1.82
NMD4YLR363C GEP7P53171 287 aa3.71□□□□□ -1.82
NMD4YLR363C YNR064CP53750 290 aa3.71□□□□□ -1.82
NMD4YLR363C PGA1P53896 198 aa3.71□□□□□ -1.82
NMD4YLR363C CYT2Q00873 224 aa3.71□□□□□ -1.82
NMD4YLR363C VPS28Q02767 242 aa3.71□□□□□ -1.82
NMD4YLR363C SNO1Q03144 224 aa3.71□□□□□ -1.82
NMD4YLR363C YPR098CQ06089 161 aa3.71□□□□□ -1.82
NMD4YLR363C CNL1Q06333 122 aa3.71□□□□□ -1.82
NMD4YLR363C PIN3Q06449 215 aa3.71□□□□□ -1.82
NMD4YLR363C RAD28Q12021 506 aa3.71□□□□□ -1.82
NMD4YLR363C FSF1Q12029 327 aaKnown RBP3.71□□□□□ -1.82
NMD4YLR363C USB1Q12208 290 aaKnown RBP3.71□□□□□ -1.82
NMD4YLR363C PST2Q12335 198 aaKnown RBP3.71□□□□□ -1.82
NMD4YLR363C MRPL23Q12487 163 aaPredicted RBP3.71□□□□□ -1.82
NMD4YLR363C YCL048W-AQ2V2Q2 79 aa3.71□□□□□ -1.82
NMD4YLR363C RPS28BP0C0X0 67 aaKnown RBP3.7□□□□□ -1.82
NMD4YLR363C YPR170W-BP0C5R9 85 aa3.7□□□□□ -1.82
NMD4YLR363C TIR1P10863 254 aa3.7□□□□□ -1.82
NMD4YLR363C RPB3P16370 318 aaKnown RBP3.7□□□□□ -1.82
NMD4YLR363C STE18P18852 110 aa3.7□□□□□ -1.82
NMD4YLR363C SEC22P22214 214 aa3.7□□□□□ -1.82
NMD4YLR363C VMA11P32842 164 aa3.7□□□□□ -1.82
NMD4YLR363C SRY1P36007 326 aa3.7□□□□□ -1.82
NMD4YLR363C MRPL24P36525 258 aaPredicted RBP3.7□□□□□ -1.82
NMD4YLR363C YHR122WP38829 231 aa3.7□□□□□ -1.82
NMD4YLR363C YJL218WP40892 196 aaKnown RBP3.7□□□□□ -1.82
NMD4YLR363C CIN2P46670 268 aa3.7□□□□□ -1.82
NMD4YLR363C YGL262WP53054 175 aa3.7□□□□□ -1.82
NMD4YLR363C YGR018CP53211 109 aa3.7□□□□□ -1.82
NMD4YLR363C TIM21P53220 239 aa3.7□□□□□ -1.82
NMD4YLR363C YNL184CP53876 108 aa3.7□□□□□ -1.82
NMD4YLR363C YPL067CQ02754 198 aa3.7□□□□□ -1.82
NMD4YLR363C ELC1Q03071 99 aa3.7□□□□□ -1.82
NMD4YLR363C MAK3Q03503 176 aa3.7□□□□□ -1.82
NMD4YLR363C RIM9Q04734 239 aa3.7□□□□□ -1.82
NMD4YLR363C MSA1Q08471 629 aa3.7□□□□□ -1.82
NMD4YLR363C FCF2Q12035 217 aaPredicted RBP3.7□□□□□ -1.82
NMD4YLR363C RPL13AQ12690 199 aaPredicted RBP3.7□□□□□ -1.82
NMD4YLR363C RPS28AQ3E7X9 67 aaPredicted RBP3.7□□□□□ -1.82
NMD4YLR363C YNR034W-AQ3E841 98 aa3.7□□□□□ -1.82
NMD4YLR363C SUS1Q6WNK7 96 aa3.7□□□□□ -1.82
NMD4YLR363C ADH1P00330 348 aaKnown RBP3.69□□□□□ -1.82
NMD4YLR363C TDH2P00358 332 aaKnown RBP3.69□□□□□ -1.82
NMD4YLR363C COX2P00410 251 aa3.69□□□□□ -1.82
NMD4YLR363C OAC1P32332 324 aa3.69□□□□□ -1.82
NMD4YLR363C SNC2P33328 115 aa3.69□□□□□ -1.82
NMD4YLR363C FRM2P37261 193 aa3.69□□□□□ -1.82
NMD4YLR363C DER1P38307 211 aa3.69□□□□□ -1.82
NMD4YLR363C SRP14P38985 146 aa3.69□□□□□ -1.82
NMD4YLR363C ACT1P60010 375 aaKnown RBP3.69□□□□□ -1.82
NMD4YLR363C HHT1P61830 136 aa3.69□□□□□ -1.82
NMD4YLR363C YMR315WQ04869 349 aaKnown RBP3.69□□□□□ -1.82
NMD4YLR363C ANT1Q06497 328 aa3.69□□□□□ -1.82
NMD4YLR363C YIL134C-AQ45U18 67 aa3.69□□□□□ -1.82
NMD4YLR363C QCR7P00128 127 aa3.68□□□□□ -1.82
NMD4YLR363C RPL39P04650 51 aa3.68□□□□□ -1.82
NMD4YLR363C RPL30P14120 105 aaKnown RBP3.68□□□□□ -1.82
NMD4YLR363C SAG1P20840 650 aa3.68□□□□□ -1.82
NMD4YLR363C YCR023CP25351 611 aa3.68□□□□□ -1.82
NMD4YLR363C OCH1P31755 480 aa3.68□□□□□ -1.82
NMD4YLR363C ARO4P32449 370 aaKnown RBP3.68□□□□□ -1.82
NMD4YLR363C TOA2P32774 122 aa3.68□□□□□ -1.82
NMD4YLR363C SHE2P36068 246 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
NMD4YLR363C PRY2P36110 329 aa3.68□□□□□ -1.82
NMD4YLR363C YEA6P39953 335 aa3.68□□□□□ -1.82
NMD4YLR363C SNU13P39990 126 aaKnown RBP3.68□□□□□ -1.82
NMD4YLR363C COX15P40086 486 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 291.3 ms