RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YRF1-1P0CX20 1796 aa1.47□□□□□ -2.17
YPT52YKR014C YRF1-5P0CX21 1796 aa1.47□□□□□ -2.17
YPT52YKR014C YRF1-8P0CX22 1796 aa1.47□□□□□ -2.17
YPT52YKR014C IDP1P21954 428 aaKnown RBP1.47□□□□□ -2.17
YPT52YKR014C YGL010WP25338 174 aa1.47□□□□□ -2.17
YPT52YKR014C STP22P25604 385 aa1.47□□□□□ -2.17
YPT52YKR014C NSA2P40078 261 aaKnown RBP1.47□□□□□ -2.17
YPT52YKR014C RPL13BP40212 199 aaKnown RBP1.47□□□□□ -2.17
YPT52YKR014C SBH1P52870 82 aa1.47□□□□□ -2.17
YPT52YKR014C MZM1Q03429 123 aaPredicted RBP1.47□□□□□ -2.17
YPT52YKR014C YHR007C-AQ07074 71 aa1.47□□□□□ -2.17
YPT52YKR014C PRP11Q07350 266 aaPredicted RBP1.47□□□□□ -2.17
YPT52YKR014C RPL13AQ12690 199 aaPredicted RBP1.47□□□□□ -2.17
YPT52YKR014C SNT2P53127 1403 aa1.47□□□□□ -2.17
YPT52YKR014C PDR10P51533 1564 aa1.47□□□□□ -2.17
YPT52YKR014C IQG1Q12280 1495 aa1.46□□□□□ -2.18
YPT52YKR014C QCR6P00127 147 aa1.46□□□□□ -2.18
YPT52YKR014C QCR8P08525 94 aa1.46□□□□□ -2.18
YPT52YKR014C GPA2P10823 449 aa1.46□□□□□ -2.18
YPT52YKR014C ARC19P33204 171 aaKnown RBP1.46□□□□□ -2.18
YPT52YKR014C XPT1P47165 209 aa1.46□□□□□ -2.18
YPT52YKR014C TTI2P47168 421 aa1.46□□□□□ -2.18
YPT52YKR014C SOL1P50278 321 aa1.46□□□□□ -2.18
YPT52YKR014C MPA43P53583 542 aaPredicted RBP1.46□□□□□ -2.18
YPT52YKR014C GAL83Q04739 417 aa1.46□□□□□ -2.18
YPT52YKR014C RNH202Q05635 350 aa1.46□□□□□ -2.18
YPT52YKR014C SMD2Q06217 110 aaKnown RBP1.46□□□□□ -2.18
YPT52YKR014C FYV12Q08559 129 aa1.46□□□□□ -2.18
YPT52YKR014C YPR013CQ12145 317 aa1.46□□□□□ -2.18
YPT52YKR014C ATP20Q12233 115 aa1.46□□□□□ -2.18
YPT52YKR014C BNI1P41832 1953 aa1.45□□□□□ -2.18
YPT52YKR014C YOR093CQ12275 1648 aa1.45□□□□□ -2.18
YPT52YKR014C AME1P38313 324 aa1.45□□□□□ -2.18
YPT52YKR014C YBR220CP38318 560 aa1.45□□□□□ -2.18
YPT52YKR014C YHL018WP38744 120 aaPredicted RBP1.45□□□□□ -2.18
YPT52YKR014C TIM13P53299 105 aa1.45□□□□□ -2.18
YPT52YKR014C DAD4P69851 72 aa1.45□□□□□ -2.18
YPT52YKR014C HSK3P69852 69 aa1.45□□□□□ -2.18
YPT52YKR014C TMA20P89886 181 aaPredicted RBP1.45□□□□□ -2.18
YPT52YKR014C VPS28Q02767 242 aa1.45□□□□□ -2.18
YPT52YKR014C MAK3Q03503 176 aa1.45□□□□□ -2.18
YPT52YKR014C YPR127WQ06494 345 aa1.45□□□□□ -2.18
YPT52YKR014C YLR053CQ12026 108 aa1.45□□□□□ -2.18
YPT52YKR014C DAS2Q12084 232 aa1.45□□□□□ -2.18
YPT52YKR014C YOR214CQ12282 236 aa1.45□□□□□ -2.18
YPT52YKR014C CAT8P39113 1433 aa1.45□□□□□ -2.18
YPT52YKR014C ARO1P08566 1588 aaKnown RBP1.45□□□□□ -2.18
YPT52YKR014C YLR422WQ06409 1932 aa1.44□□□□□ -2.18
YPT52YKR014C UBR2Q07963 1872 aa1.44□□□□□ -2.18
YPT52YKR014C MDM35O60200 86 aa1.44□□□□□ -2.18
YPT52YKR014C COX8P04039 78 aa1.44□□□□□ -2.18
YPT52YKR014C HSP30P25619 332 aa1.44□□□□□ -2.18
YPT52YKR014C GSP2P32836 220 aaKnown RBP1.44□□□□□ -2.18
YPT52YKR014C NUF2P33895 451 aa1.44□□□□□ -2.18
YPT52YKR014C UPS2P35200 230 aa1.44□□□□□ -2.18
YPT52YKR014C SFK1P35735 353 aa1.44□□□□□ -2.18
YPT52YKR014C YFH7P43591 353 aa1.44□□□□□ -2.18
YPT52YKR014C GRX5Q02784 150 aa1.44□□□□□ -2.18
YPT52YKR014C DNF3Q12674 1656 aa1.44□□□□□ -2.18
YPT52YKR014C TY3B-GQ99315 1547 aa1.44□□□□□ -2.18
YPT52YKR014C MSB2P32334 1306 aa1.43□□□□□ -2.18
YPT52YKR014C MMS1Q06211 1407 aa1.43□□□□□ -2.18
YPT52YKR014C RPL2AP0CX45 254 aaKnown RBP1.43□□□□□ -2.18
YPT52YKR014C RPL2BP0CX46 254 aaKnown RBP1.43□□□□□ -2.18
YPT52YKR014C FPR1P20081 114 aaKnown RBP1.43□□□□□ -2.18
YPT52YKR014C CPR5P35176 225 aa1.43□□□□□ -2.18
YPT52YKR014C RRT1P38192 103 aa1.43□□□□□ -2.18
YPT52YKR014C CSH1P38287 376 aa1.43□□□□□ -2.18
YPT52YKR014C FYV4P38783 130 aaPredicted RBP1.43□□□□□ -2.18
YPT52YKR014C YNL200CP40165 246 aaKnown RBP1.43□□□□□ -2.18
YPT52YKR014C GLR1P41921 483 aaKnown RBP1.43□□□□□ -2.18
YPT52YKR014C YGL235WP53071 178 aa1.43□□□□□ -2.18
YPT52YKR014C THG1P53215 237 aaKnown RBP1.43□□□□□ -2.18
YPT52YKR014C YKR005CQ02203 525 aa1.43□□□□□ -2.18
YPT52YKR014C PIR1Q03178 341 aa1.43□□□□□ -2.18
YPT52YKR014C YDR476CQ03362 224 aa1.43□□□□□ -2.18
YPT52YKR014C THI74Q04083 370 aa1.43□□□□□ -2.18
YPT52YKR014C FIT2Q08906 153 aa1.43□□□□□ -2.18
YPT52YKR014C RDI1Q12434 202 aa1.43□□□□□ -2.18
YPT52YKR014C HAP1P0CE41 1502 aa1.43□□□□□ -2.18
YPT52YKR014C VMR1P38735 1592 aa1.42□□□□□ -2.18
YPT52YKR014C GEA1P47102 1408 aaPredicted RBP1.42□□□□□ -2.18
YPT52YKR014C YOR015WQ12169 119 aa1.42□□□□□ -2.18
YPT52YKR014C YNL146C-AQ3E7Z1 64 aa1.42□□□□□ -2.18
YPT52YKR014C NUP188P52593 1655 aaKnown RBP1.42□□□□□ -2.18
YPT52YKR014C PDR5P33302 1511 aaKnown RBP1.41□□□□□ -2.18
YPT52YKR014C RAD6P06104 172 aa1.41□□□□□ -2.18
YPT52YKR014C RPS28BP0C0X0 67 aaKnown RBP1.41□□□□□ -2.18
YPT52YKR014C YCR023CP25351 611 aa1.41□□□□□ -2.18
YPT52YKR014C EDC3P39998 551 aaKnown RBP1.41□□□□□ -2.18
YPT52YKR014C RIO2P40160 425 aaKnown RBP1.41□□□□□ -2.18
YPT52YKR014C ALB1P47019 175 aaPredicted RBP1.41□□□□□ -2.18
YPT52YKR014C RCE1Q03530 315 aa1.41□□□□□ -2.18
YPT52YKR014C RRP17Q04031 235 aaPredicted RBP1.41□□□□□ -2.18
YPT52YKR014C NSL1Q12143 216 aa1.41□□□□□ -2.18
YPT52YKR014C RPS28AQ3E7X9 67 aaPredicted RBP1.41□□□□□ -2.18
YPT52YKR014C IML1P47170 1584 aa1.41□□□□□ -2.18
YPT52YKR014C GCN2P15442 1659 aa1.41□□□□□ -2.18
YPT52YKR014C UBC6P33296 250 aaPredicted RBP1.4□□□□□ -2.19
YPT52YKR014C FIG1P38224 298 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms