RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W RIO2P40160 425 aaKnown RBP0.7□□□□□ -2.3
HIT1YJR055W PET191Q02772 108 aa0.7□□□□□ -2.3
HIT1YJR055W RCE1Q03530 315 aa0.7□□□□□ -2.3
HIT1YJR055W YMR295CQ03559 197 aa0.7□□□□□ -2.3
HIT1YJR055W GRX8Q05926 109 aa0.7□□□□□ -2.3
HIT1YJR055W YPR114WQ06107 315 aa0.7□□□□□ -2.3
HIT1YJR055W ABP140Q08641 628 aaKnown RBP0.7□□□□□ -2.3
HIT1YJR055W YNL146C-AQ3E7Z1 64 aa0.7□□□□□ -2.3
HIT1YJR055W RPL27AP0C2H6 136 aaKnown RBP0.69□□□□□ -2.3
HIT1YJR055W NSP1P14907 823 aaKnown RBP0.69□□□□□ -2.3
HIT1YJR055W TCA17P32613 152 aa0.69□□□□□ -2.3
HIT1YJR055W UPS2P35200 230 aa0.69□□□□□ -2.3
HIT1YJR055W RPS27AP35997 82 aaKnown RBP0.69□□□□□ -2.3
HIT1YJR055W YKT6P36015 200 aaKnown RBP0.69□□□□□ -2.3
HIT1YJR055W SHE2P36068 246 aaKnown RBP RIP-Chip data0.69□□□□□ -2.3not detected
HIT1YJR055W RPS27BP38711 82 aa0.69□□□□□ -2.3
HIT1YJR055W YPL073CP40323 161 aa0.69□□□□□ -2.3
HIT1YJR055W MMS2P53152 137 aa0.69□□□□□ -2.3
HIT1YJR055W POP3P53833 195 aaPredicted RBP0.69□□□□□ -2.3
HIT1YJR055W DGA1Q08650 418 aa0.69□□□□□ -2.3
HIT1YJR055W IGO2Q9P305 131 aa0.69□□□□□ -2.3
HIT1YJR055W POR1P04840 283 aaKnown RBP0.68□□□□□ -2.3
HIT1YJR055W SEC11P15367 167 aa0.68□□□□□ -2.3
HIT1YJR055W ATP15P21306 62 aa0.68□□□□□ -2.3
HIT1YJR055W TRX3P25372 127 aa0.68□□□□□ -2.3
HIT1YJR055W RFA3P26755 122 aaKnown RBP0.68□□□□□ -2.3
HIT1YJR055W YRA2P36036 203 aaKnown RBP RIP-Chip data0.68□□□□□ -2.3not detected
HIT1YJR055W OPY1P38271 328 aa0.68□□□□□ -2.3
HIT1YJR055W PRS3P38689 320 aaKnown RBP0.68□□□□□ -2.3
HIT1YJR055W YHL037CP38733 133 aa0.68□□□□□ -2.3
HIT1YJR055W CYC2P38909 366 aa0.68□□□□□ -2.3
HIT1YJR055W EDC3P39998 551 aaKnown RBP0.68□□□□□ -2.3
HIT1YJR055W YFL051CP43552 160 aa0.68□□□□□ -2.3
HIT1YJR055W UBC7Q02159 165 aa0.68□□□□□ -2.3
HIT1YJR055W YMR099CQ03161 297 aaKnown RBP0.68□□□□□ -2.3
HIT1YJR055W ARO80Q04052 950 aa0.68□□□□□ -2.3
HIT1YJR055W YLR036CQ07986 203 aa0.68□□□□□ -2.3
HIT1YJR055W YOL014WQ08110 124 aa0.68□□□□□ -2.3
HIT1YJR055W YGR035W-AQ45U48 73 aa0.68□□□□□ -2.3
HIT1YJR055W YML100W-AQ8TGT0 57 aa0.68□□□□□ -2.3
HIT1YJR055W MBF1O14467 151 aaKnown RBP0.67□□□□□ -2.3
HIT1YJR055W MDM35O60200 86 aa0.67□□□□□ -2.3
HIT1YJR055W SEC4P07560 215 aaKnown RBP0.67□□□□□ -2.3
HIT1YJR055W YJL197C-AP0C5P0 93 aa0.67□□□□□ -2.3
HIT1YJR055W YPK2P18961 677 aa0.67□□□□□ -2.3
HIT1YJR055W AUA1P32450 94 aa0.67□□□□□ -2.3
HIT1YJR055W PAN3P36102 679 aaPredicted RBP0.67□□□□□ -2.3
HIT1YJR055W YEL073CP39974 107 aa0.67□□□□□ -2.3
HIT1YJR055W ARO8P53090 500 aaKnown RBP0.67□□□□□ -2.3
HIT1YJR055W SHH3Q04487 196 aa0.67□□□□□ -2.3
HIT1YJR055W YLR031WQ07978 186 aa0.67□□□□□ -2.3
HIT1YJR055W GET4Q12125 312 aa0.67□□□□□ -2.3
HIT1YJR055W Q0144Q9ZZW2 109 aa0.67□□□□□ -2.3
HIT1YJR055W MRS1P07266 363 aa0.66□□□□□ -2.3
HIT1YJR055W YFR010W-AP0C5N0 62 aa0.66□□□□□ -2.3
HIT1YJR055W STP22P25604 385 aa0.66□□□□□ -2.3
HIT1YJR055W FIG1P38224 298 aa0.66□□□□□ -2.3
HIT1YJR055W YEA4P40004 342 aa0.66□□□□□ -2.3
HIT1YJR055W YER076CP40049 302 aa0.66□□□□□ -2.3
HIT1YJR055W YER134CP40081 178 aa0.66□□□□□ -2.3
HIT1YJR055W PDS1P40316 373 aaPredicted RBP0.66□□□□□ -2.3
HIT1YJR055W YIR020CP40575 100 aa0.66□□□□□ -2.3
HIT1YJR055W MPA43P53583 542 aaPredicted RBP0.66□□□□□ -2.3
HIT1YJR055W TIM8P57744 87 aa0.66□□□□□ -2.3
HIT1YJR055W GRX5Q02784 150 aa0.66□□□□□ -2.3
HIT1YJR055W YMR007WQ03675 126 aa0.66□□□□□ -2.3
HIT1YJR055W RIM9Q04734 239 aa0.66□□□□□ -2.3
HIT1YJR055W UIP4Q08926 304 aa0.66□□□□□ -2.3
HIT1YJR055W YPR013CQ12145 317 aa0.66□□□□□ -2.3
HIT1YJR055W YOR032W-AQ8TGS1 66 aa0.66□□□□□ -2.3
HIT1YJR055W ODC2Q99297 307 aa0.66□□□□□ -2.3
HIT1YJR055W YAR023CD6VPM8 179 aa0.65□□□□□ -2.31
HIT1YJR055W JIP3O13555 125 aa0.65□□□□□ -2.31
HIT1YJR055W VAR1P02381 398 aa0.65□□□□□ -2.31
HIT1YJR055W SNF4P12904 322 aa0.65□□□□□ -2.31
HIT1YJR055W CAF4P36130 643 aa0.65□□□□□ -2.31
HIT1YJR055W MTW1P39731 289 aa0.65□□□□□ -2.31
HIT1YJR055W SOK1P40317 901 aa0.65□□□□□ -2.31
HIT1YJR055W SER2P42941 309 aa0.65□□□□□ -2.31
HIT1YJR055W TMA22P47089 198 aaPredicted RBP0.65□□□□□ -2.31
HIT1YJR055W ARP3P47117 449 aaKnown RBP0.65□□□□□ -2.31
HIT1YJR055W SBH1P52870 82 aa0.65□□□□□ -2.31
HIT1YJR055W RTC4P53850 401 aa0.65□□□□□ -2.31
HIT1YJR055W TIM11P81449 96 aaPredicted RBP0.65□□□□□ -2.31
HIT1YJR055W MIX14Q04341 121 aa0.65□□□□□ -2.31
HIT1YJR055W DYN3Q04949 312 aa0.65□□□□□ -2.31
HIT1YJR055W RTR2Q12378 196 aa0.65□□□□□ -2.31
HIT1YJR055W OCA6Q12454 224 aa0.65□□□□□ -2.31
HIT1YJR055W SPO13P23624 291 aa0.64□□□□□ -2.31
HIT1YJR055W TAH1P25638 111 aaPredicted RBP0.64□□□□□ -2.31
HIT1YJR055W SFK1P35735 353 aa0.64□□□□□ -2.31
HIT1YJR055W GIM4P40005 111 aaKnown RBP0.64□□□□□ -2.31
HIT1YJR055W RPL37AP49166 88 aaKnown RBP0.64□□□□□ -2.31
HIT1YJR055W SBH2P52871 88 aa0.64□□□□□ -2.31
HIT1YJR055W TIM13P53299 105 aa0.64□□□□□ -2.31
HIT1YJR055W UPS3Q04006 179 aa0.64□□□□□ -2.31
HIT1YJR055W IRC23Q08416 157 aa0.64□□□□□ -2.31
HIT1YJR055W YPR202WQ08993 238 aa0.64□□□□□ -2.31
HIT1YJR055W ADF1Q2V2Q1 113 aa0.64□□□□□ -2.31
HIT1YJR055W YPR014CQ6B0W2 109 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms