RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	YEL073C	P39974	107 aa		1.02	□□□□□ -2.25
IST3	YIR005W	GLR1	P41921	483 aa	Known RBP	1.02	□□□□□ -2.25
IST3	YIR005W	SYM1	Q06563	197 aa		1.02	□□□□□ -2.25
IST3	YIR005W	TRM3	Q07527	1436 aa		1.02	□□□□□ -2.25
IST3	YIR005W	YLR053C	Q12026	108 aa		1.02	□□□□□ -2.25
IST3	YIR005W	UBI4	P0CG63	381 aa	Known RBP	1.01	□□□□□ -2.25
IST3	YIR005W	MAK31	P23059	88 aa		1.01	□□□□□ -2.25
IST3	YIR005W	YBL010C	P32788	280 aa		1.01	□□□□□ -2.25
IST3	YIR005W	PTC1	P35182	281 aa		1.01	□□□□□ -2.25
IST3	YIR005W	SLM6	P38343	150 aa		1.01	□□□□□ -2.25
IST3	YIR005W	PAC10	P48363	199 aa		1.01	□□□□□ -2.25
IST3	YIR005W	TMA20	P89886	181 aa	Predicted RBP	1.01	□□□□□ -2.25
IST3	YIR005W	AVO2	Q04749	426 aa		1.01	□□□□□ -2.25
IST3	YIR005W	YPR202W	Q08993	238 aa		1.01	□□□□□ -2.25
IST3	YIR005W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	1	□□□□□ -2.25	not detected
IST3	YIR005W	YDR391C	Q04170	232 aa		1	□□□□□ -2.25
IST3	YIR005W	YMR030W-A	Q3E760	96 aa		1	□□□□□ -2.25
IST3	YIR005W	ATP5	P09457	212 aa		0.99	□□□□□ -2.25
IST3	YIR005W	RPS28B	P0C0X0	67 aa	Known RBP	0.99	□□□□□ -2.25
IST3	YIR005W	DER1	P38307	211 aa		0.99	□□□□□ -2.25
IST3	YIR005W	CCC1	P47818	322 aa		0.99	□□□□□ -2.25
IST3	YIR005W	NQM1	P53228	333 aa	Predicted RBP	0.99	□□□□□ -2.25
IST3	YIR005W	LSM3	P57743	89 aa	Known RBP	0.99	□□□□□ -2.25
IST3	YIR005W	GRX5	Q02784	150 aa		0.99	□□□□□ -2.25
IST3	YIR005W	LIP1	Q03579	150 aa		0.99	□□□□□ -2.25
IST3	YIR005W	YDL241W	Q07738	123 aa		0.99	□□□□□ -2.25
IST3	YIR005W	YLR046C	Q12253	270 aa		0.99	□□□□□ -2.25
IST3	YIR005W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.99	□□□□□ -2.25
IST3	YIR005W	SLH1	P53327	1967 aa	Known RBP	0.98	□□□□□ -2.25
IST3	YIR005W	YBR242W	P38331	238 aa		0.98	□□□□□ -2.25
IST3	YIR005W	MOB1	P40484	314 aa		0.98	□□□□□ -2.25
IST3	YIR005W	MAK3	Q03503	176 aa		0.98	□□□□□ -2.25
IST3	YIR005W	YPR114W	Q06107	315 aa		0.98	□□□□□ -2.25
IST3	YIR005W	YPR203W	Q08994	102 aa		0.98	□□□□□ -2.25
IST3	YIR005W	NSL1	Q12143	216 aa		0.98	□□□□□ -2.25
IST3	YIR005W	RPL30	P14120	105 aa	Known RBP	0.97	□□□□□ -2.25
IST3	YIR005W	UBC6	P33296	250 aa	Predicted RBP	0.97	□□□□□ -2.25
IST3	YIR005W	MRPL15	P36523	253 aa		0.97	□□□□□ -2.25
IST3	YIR005W	HTD2	P38790	280 aa	Known RBP	0.97	□□□□□ -2.25
IST3	YIR005W	HUA1	P40325	198 aa		0.97	□□□□□ -2.25
IST3	YIR005W	YGR269W	P40326	108 aa		0.97	□□□□□ -2.25
IST3	YIR005W	FIP1	P45976	327 aa		0.97	□□□□□ -2.25
IST3	YIR005W	SBH2	P52871	88 aa		0.97	□□□□□ -2.25
IST3	YIR005W	YDR476C	Q03362	224 aa		0.97	□□□□□ -2.25
IST3	YIR005W	YDR102C	Q03864	110 aa		0.97	□□□□□ -2.25
IST3	YIR005W	HRD1	Q08109	551 aa		0.97	□□□□□ -2.25
IST3	YIR005W	SPS2	P08459	502 aa		0.96	□□□□□ -2.26
IST3	YIR005W	INO4	P13902	151 aa		0.96	□□□□□ -2.26
IST3	YIR005W	PEX34	P25584	144 aa		0.96	□□□□□ -2.26
IST3	YIR005W	UBC8	P28263	218 aa		0.96	□□□□□ -2.26
IST3	YIR005W	ARC19	P33204	171 aa	Known RBP	0.96	□□□□□ -2.26
IST3	YIR005W	YPT31	P38555	223 aa	Known RBP	0.96	□□□□□ -2.26
IST3	YIR005W	YHL037C	P38733	133 aa		0.96	□□□□□ -2.26
IST3	YIR005W	DLS1	P40366	167 aa		0.96	□□□□□ -2.26
IST3	YIR005W	APQ12	P40532	138 aa		0.96	□□□□□ -2.26
IST3	YIR005W	RPL37A	P49166	88 aa	Known RBP	0.96	□□□□□ -2.26
IST3	YIR005W	YNR064C	P53750	290 aa		0.96	□□□□□ -2.26
IST3	YIR005W	HHT1	P61830	136 aa		0.96	□□□□□ -2.26
IST3	YIR005W	YML079W	Q03629	201 aa		0.96	□□□□□ -2.26
IST3	YIR005W	ATG10	Q07879	167 aa		0.96	□□□□□ -2.26
IST3	YIR005W	YDL157C	Q12082	118 aa		0.96	□□□□□ -2.26
IST3	YIR005W	MRS4	P23500	304 aa		0.95	□□□□□ -2.26
IST3	YIR005W	BUB2	P26448	306 aa	Predicted RBP	0.95	□□□□□ -2.26
IST3	YIR005W	AHT1	P29589	182 aa		0.95	□□□□□ -2.26
IST3	YIR005W	FIG1	P38224	298 aa		0.95	□□□□□ -2.26
IST3	YIR005W	YFL051C	P43552	160 aa		0.95	□□□□□ -2.26
IST3	YIR005W	YGL193C	P53097	103 aa		0.95	□□□□□ -2.26
IST3	YIR005W	FIT1	Q04433	528 aa		0.95	□□□□□ -2.26
IST3	YIR005W	UIP4	Q08926	304 aa		0.95	□□□□□ -2.26
IST3	YIR005W	EFG1	Q3E705	233 aa	Known RBP	0.95	□□□□□ -2.26
IST3	YIR005W	QCR6	P00127	147 aa		0.94	□□□□□ -2.26
IST3	YIR005W	SHB17	P36136	271 aa	Known RBP	0.94	□□□□□ -2.26
IST3	YIR005W	CMC4	Q3E7A9	73 aa		0.94	□□□□□ -2.26
IST3	YIR005W	PET20	Q99373	253 aa		0.94	□□□□□ -2.26
IST3	YIR005W	RPS25B	P0C0T4	108 aa	Known RBP	0.93	□□□□□ -2.26
IST3	YIR005W	SRP102	P36057	244 aa	Predicted RBP	0.93	□□□□□ -2.26
IST3	YIR005W	YJL218W	P40892	196 aa	Known RBP	0.93	□□□□□ -2.26
IST3	YIR005W	YMR007W	Q03675	126 aa		0.93	□□□□□ -2.26
IST3	YIR005W	RPS25A	Q3E792	108 aa	Predicted RBP	0.93	□□□□□ -2.26
IST3	YIR005W	SPT14	P32363	452 aa		0.92	□□□□□ -2.26
IST3	YIR005W	YER181C	P40097	107 aa		0.92	□□□□□ -2.26
IST3	YIR005W	SPA2	P23201	1466 aa	Known RBP	0.92	□□□□□ -2.26
IST3	YIR005W	RIF1	P29539	1916 aa		0.91	□□□□□ -2.26
IST3	YIR005W	PBI2	P0CT04	75 aa	Known RBP	0.91	□□□□□ -2.26
IST3	YIR005W	PHO13	P19881	312 aa		0.91	□□□□□ -2.26
IST3	YIR005W	HSP150	P32478	413 aa		0.91	□□□□□ -2.26
IST3	YIR005W	CIN5	P40917	295 aa		0.91	□□□□□ -2.26
IST3	YIR005W	YGL230C	P53074	147 aa		0.91	□□□□□ -2.26
IST3	YIR005W	ADE6	P38972	1358 aa	Known RBP	0.91	□□□□□ -2.26
IST3	YIR005W	TAF2	P23255	1407 aa		0.9	□□□□□ -2.26
IST3	YIR005W	YKR070W	P36151	352 aa	Known RBP	0.9	□□□□□ -2.27
IST3	YIR005W	MRPL24	P36525	258 aa	Predicted RBP	0.9	□□□□□ -2.27
IST3	YIR005W	YEL014C	P39999	101 aa		0.9	□□□□□ -2.27
IST3	YIR005W	GEP7	P53171	287 aa		0.9	□□□□□ -2.27
IST3	YIR005W	RFU1	Q08003	200 aa		0.9	□□□□□ -2.27
IST3	YIR005W	LCL2	Q08045	131 aa		0.9	□□□□□ -2.27
IST3	YIR005W	KIN28	P06242	306 aa		0.89	□□□□□ -2.27
IST3	YIR005W	SRP21	P32342	167 aa		0.89	□□□□□ -2.27
IST3	YIR005W	GLC8	P41818	229 aa		0.89	□□□□□ -2.27
IST3	YIR005W	FMN1	Q03778	218 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms