RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W CBP6P07253 162 aaPredicted RBP3.79□□□□□ -1.8
UBP7YIL156W RPC19P28000 142 aaKnown RBP3.79□□□□□ -1.8
UBP7YIL156W UGX2P32772 223 aa3.79□□□□□ -1.8
UBP7YIL156W CNL1Q06333 122 aa3.79□□□□□ -1.8
UBP7YIL156W OCA6Q12454 224 aa3.79□□□□□ -1.8
UBP7YIL156W RPL9AP05738 191 aaKnown RBP3.78□□□□□ -1.8
UBP7YIL156W KIN28P06242 306 aa3.78□□□□□ -1.8
UBP7YIL156W PRE5P40302 234 aaKnown RBP3.78□□□□□ -1.8
UBP7YIL156W RPL9BP51401 191 aaKnown RBP3.78□□□□□ -1.8
UBP7YIL156W DIG2Q03373 323 aaKnown RBP3.78□□□□□ -1.8
UBP7YIL156W NAT3Q06504 195 aa3.78□□□□□ -1.8
UBP7YIL156W RPS1BP23248 255 aaKnown RBP3.78□□□□□ -1.8
UBP7YIL156W SHE2P36068 246 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
UBP7YIL156W FCY21P40039 528 aa3.78□□□□□ -1.8
UBP7YIL156W GLR1P41921 483 aaKnown RBP3.78□□□□□ -1.8
UBP7YIL156W ALB1P47019 175 aaPredicted RBP3.78□□□□□ -1.8
UBP7YIL156W YLR412C-AQ3E742 68 aa3.78□□□□□ -1.8
UBP7YIL156W YOR304C-AO14468 76 aa3.78□□□□□ -1.81
UBP7YIL156W ATP5P09457 212 aa3.78□□□□□ -1.81
UBP7YIL156W MRPS16Q02608 121 aa3.78□□□□□ -1.81
UBP7YIL156W RPL22AP05749 121 aaKnown RBP3.77□□□□□ -1.81
UBP7YIL156W MRP49P32388 137 aa3.77□□□□□ -1.81
UBP7YIL156W VMA11P32842 164 aa3.77□□□□□ -1.81
UBP7YIL156W MRPL24P36525 258 aaPredicted RBP3.77□□□□□ -1.81
UBP7YIL156W YHR125WP38831 101 aa3.77□□□□□ -1.81
UBP7YIL156W YGR039WP53225 103 aa3.77□□□□□ -1.81
UBP7YIL156W VMA7P39111 118 aa3.77□□□□□ -1.81
UBP7YIL156W SLM2P53955 656 aa3.77□□□□□ -1.81
UBP7YIL156W PAN3P36102 679 aaPredicted RBP3.76□□□□□ -1.81
UBP7YIL156W VPS71Q03433 280 aa3.76□□□□□ -1.81
UBP7YIL156W TIR1P10863 254 aa3.76□□□□□ -1.81
UBP7YIL156W TFC1P32367 649 aa3.76□□□□□ -1.81
UBP7YIL156W UTP11P34247 250 aaPredicted RBP3.76□□□□□ -1.81
UBP7YIL156W VTC1P40046 129 aaRIP-Chip data3.76□□□□□ -1.81not detected
UBP7YIL156W SMD1Q02260 146 aaPredicted RBP3.76□□□□□ -1.81
UBP7YIL156W RUB1Q03919 77 aa3.76□□□□□ -1.81
UBP7YIL156W YIR021W-AQ3E739 70 aa3.76□□□□□ -1.81
UBP7YIL156W TIM9O74700 87 aa3.76□□□□□ -1.81
UBP7YIL156W RAD10P06838 210 aa3.76□□□□□ -1.81
UBP7YIL156W TRS20P38334 175 aa3.76□□□□□ -1.81
UBP7YIL156W YNL200CP40165 246 aaKnown RBP3.76□□□□□ -1.81
UBP7YIL156W CGI121Q03705 181 aaKnown RBP3.76□□□□□ -1.81
UBP7YIL156W FCF1Q05498 189 aaPredicted RBP3.76□□□□□ -1.81
UBP7YIL156W TAD3Q9URQ3 322 aa3.76□□□□□ -1.81
UBP7YIL156W FMP46P36141 133 aaKnown RBP3.75□□□□□ -1.81
UBP7YIL156W YER134CP40081 178 aa3.75□□□□□ -1.81
UBP7YIL156W YER181CP40097 107 aa3.75□□□□□ -1.81
UBP7YIL156W ARC15P40518 154 aaRIP-Chip data3.75□□□□□ -1.81not detected
UBP7YIL156W IES3Q12345 250 aa3.75□□□□□ -1.81
UBP7YIL156W SPT14P32363 452 aa3.75□□□□□ -1.81
UBP7YIL156W PGD1P40356 397 aa3.75□□□□□ -1.81
UBP7YIL156W YML122CQ03207 126 aa3.74□□□□□ -1.81
UBP7YIL156W YMR230W-AQ3E7B5 62 aa3.74□□□□□ -1.81
UBP7YIL156W SRL3P36167 246 aa3.74□□□□□ -1.81
UBP7YIL156W YDR274CP87283 123 aa3.74□□□□□ -1.81
UBP7YIL156W FCY1Q12178 158 aa3.74□□□□□ -1.81
UBP7YIL156W YAR023CD6VPM8 179 aa3.74□□□□□ -1.81
UBP7YIL156W GSP1P32835 219 aaKnown RBP3.74□□□□□ -1.81
UBP7YIL156W GSP2P32836 220 aaKnown RBP3.74□□□□□ -1.81
UBP7YIL156W FYV4P38783 130 aaPredicted RBP3.74□□□□□ -1.81
UBP7YIL156W AYR1P40471 297 aa3.74□□□□□ -1.81
UBP7YIL156W YGL193CP53097 103 aa3.74□□□□□ -1.81
UBP7YIL156W LDB18Q07887 179 aa3.74□□□□□ -1.81
UBP7YIL156W SRP21P32342 167 aa3.73□□□□□ -1.81
UBP7YIL156W PTC1P35182 281 aa3.73□□□□□ -1.81
UBP7YIL156W MRPL17P36528 281 aa3.73□□□□□ -1.81
UBP7YIL156W YKR005CQ02203 525 aa3.73□□□□□ -1.81
UBP7YIL156W SPC3Q12133 184 aa3.73□□□□□ -1.81
UBP7YIL156W YOR214CQ12282 236 aa3.73□□□□□ -1.81
UBP7YIL156W PHO85P17157 305 aa3.73□□□□□ -1.81
UBP7YIL156W GPI2P46961 280 aa3.73□□□□□ -1.81
UBP7YIL156W DSK2P48510 373 aa3.73□□□□□ -1.81
UBP7YIL156W SMX2P40204 77 aaKnown RBP3.72□□□□□ -1.81
UBP7YIL156W YJL218WP40892 196 aaKnown RBP3.72□□□□□ -1.81
UBP7YIL156W APS2Q00381 147 aa3.72□□□□□ -1.81
UBP7YIL156W SPG3Q04398 127 aaPredicted RBP3.72□□□□□ -1.81
UBP7YIL156W YOR289WQ12012 251 aaPredicted RBP3.72□□□□□ -1.81
UBP7YIL156W ATO3Q12359 275 aa3.72□□□□□ -1.81
UBP7YIL156W YLR099W-AQ3E798 87 aa3.72□□□□□ -1.81
UBP7YIL156W FLO1P32768 1537 aa3.72□□□□□ -1.81
UBP7YIL156W FMP49A0A023PZB3 126 aa3.72□□□□□ -1.81
UBP7YIL156W CPA1P07258 411 aaKnown RBP3.72□□□□□ -1.81
UBP7YIL156W YER188WP40103 239 aa3.72□□□□□ -1.81
UBP7YIL156W YMR099CQ03161 297 aaKnown RBP3.72□□□□□ -1.81
UBP7YIL156W MCH1Q07376 486 aa3.72□□□□□ -1.81
UBP7YIL156W FYV12Q08559 129 aa3.72□□□□□ -1.81
UBP7YIL156W ODC2Q99297 307 aa3.72□□□□□ -1.81
UBP7YIL156W ECO1P43605 281 aa3.72□□□□□ -1.81
UBP7YIL156W CTR2P38865 189 aa3.71□□□□□ -1.82
UBP7YIL156W GON7P46984 123 aa3.71□□□□□ -1.82
UBP7YIL156W AIF1P52923 378 aa3.71□□□□□ -1.82
UBP7YIL156W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
UBP7YIL156W YNL277W-AQ3E7Z0 62 aa3.71□□□□□ -1.82
UBP7YIL156W YHR032W-AP0C5N6 59 aa3.7□□□□□ -1.82
UBP7YIL156W YHR140WP38842 239 aa3.7□□□□□ -1.82
UBP7YIL156W RGI1P40043 161 aaPredicted RBP3.7□□□□□ -1.82
UBP7YIL156W YGL260WP53056 76 aa3.7□□□□□ -1.82
UBP7YIL156W HYM1P32464 399 aa3.7□□□□□ -1.82
UBP7YIL156W YPI1P43587 155 aa3.7□□□□□ -1.82
UBP7YIL156W GAL83Q04739 417 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms