RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W TMA19P35691 167 aaKnown RBP1.19□□□□□ -2.22
SEC28YIL076W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
SEC28YIL076W VPS71Q03433 280 aa1.19□□□□□ -2.22
SEC28YIL076W RRT8Q08219 342 aa1.19□□□□□ -2.22
SEC28YIL076W COX5BP00425 151 aa1.18□□□□□ -2.22
SEC28YIL076W RPC19P28000 142 aaKnown RBP1.18□□□□□ -2.22
SEC28YIL076W IDH1P28834 360 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SEC28YIL076W UBC7Q02159 165 aa1.18□□□□□ -2.22
SEC28YIL076W ABF2Q02486 183 aa1.18□□□□□ -2.22
SEC28YIL076W YDR102CQ03864 110 aa1.18□□□□□ -2.22
SEC28YIL076W ATG38Q05789 226 aaKnown RBP1.18□□□□□ -2.22
SEC28YIL076W GGA1Q06336 557 aa1.18□□□□□ -2.22
SEC28YIL076W NSL1Q12143 216 aa1.18□□□□□ -2.22
SEC28YIL076W YOR029WQ12243 111 aa1.18□□□□□ -2.22
SEC28YIL076W YCL048W-AQ2V2Q2 79 aa1.18□□□□□ -2.22
SEC28YIL076W YPR170W-BP0C5R9 85 aa1.17□□□□□ -2.22
SEC28YIL076W CLG1P35190 452 aa1.17□□□□□ -2.22
SEC28YIL076W YER076CP40049 302 aa1.17□□□□□ -2.22
SEC28YIL076W HPM1P40481 377 aa1.17□□□□□ -2.22
SEC28YIL076W RPL37AP49166 88 aaKnown RBP1.17□□□□□ -2.22
SEC28YIL076W BRR6P53062 197 aa1.17□□□□□ -2.22
SEC28YIL076W GEP7P53171 287 aa1.17□□□□□ -2.22
SEC28YIL076W HHT1P61830 136 aa1.17□□□□□ -2.22
SEC28YIL076W AIM36Q03798 255 aa1.17□□□□□ -2.22
SEC28YIL076W BNA7Q04066 261 aa1.17□□□□□ -2.22
SEC28YIL076W KRE28Q04431 385 aa1.17□□□□□ -2.22
SEC28YIL076W DYN3Q04949 312 aa1.17□□□□□ -2.22
SEC28YIL076W YOR289WQ12012 251 aaPredicted RBP1.17□□□□□ -2.22
SEC28YIL076W YKL068W-AQ3E826 78 aa1.17□□□□□ -2.22
SEC28YIL076W YMR105W-AQ8TGS8 64 aa1.17□□□□□ -2.22
SEC28YIL076W THP2O13539 261 aaKnown RBP1.16□□□□□ -2.22
SEC28YIL076W RPL39P04650 51 aa1.16□□□□□ -2.22
SEC28YIL076W SKG1P36169 355 aa1.16□□□□□ -2.22
SEC28YIL076W CUE1P38428 203 aa1.16□□□□□ -2.22
SEC28YIL076W YER121WP40076 114 aa1.16□□□□□ -2.22
SEC28YIL076W FLX1P40464 311 aa1.16□□□□□ -2.22
SEC28YIL076W GCN20P43535 752 aaKnown RBP1.16□□□□□ -2.22
SEC28YIL076W YGL101WP53144 215 aa1.16□□□□□ -2.22
SEC28YIL076W YNR064CP53750 290 aa1.16□□□□□ -2.22
SEC28YIL076W YNL033WP53964 284 aa1.16□□□□□ -2.22
SEC28YIL076W YNL019CP53975 284 aa1.16□□□□□ -2.22
SEC28YIL076W RRN5Q02983 363 aa1.16□□□□□ -2.22
SEC28YIL076W ANT1Q06497 328 aa1.16□□□□□ -2.22
SEC28YIL076W GPI11Q06636 219 aa1.16□□□□□ -2.22
SEC28YIL076W PRP11Q07350 266 aaPredicted RBP1.16□□□□□ -2.22
SEC28YIL076W UIP4Q08926 304 aa1.16□□□□□ -2.22
SEC28YIL076W SPC3Q12133 184 aa1.16□□□□□ -2.22
SEC28YIL076W MHF2Q3E829 80 aa1.16□□□□□ -2.22
SEC28YIL076W TIM9O74700 87 aa1.15□□□□□ -2.23
SEC28YIL076W SIR2P06700 562 aa1.15□□□□□ -2.23
SEC28YIL076W CDC10P25342 322 aaKnown RBP1.15□□□□□ -2.23
SEC28YIL076W ATP7P30902 174 aa1.15□□□□□ -2.23
SEC28YIL076W ASF2P32448 525 aaPredicted RBP1.15□□□□□ -2.23
SEC28YIL076W FIG1P38224 298 aa1.15□□□□□ -2.23
SEC28YIL076W RMD6P39975 231 aa1.15□□□□□ -2.23
SEC28YIL076W FIP1P45976 327 aa1.15□□□□□ -2.23
SEC28YIL076W YNR077CP53758 84 aa1.15□□□□□ -2.23
SEC28YIL076W YDC1Q02896 317 aa1.15□□□□□ -2.23
SEC28YIL076W DML1Q03652 475 aa1.15□□□□□ -2.23
SEC28YIL076W YGR035W-AQ45U48 73 aa1.15□□□□□ -2.23
SEC28YIL076W NTG1P31378 399 aa1.14□□□□□ -2.23
SEC28YIL076W AUA1P32450 94 aa1.14□□□□□ -2.23
SEC28YIL076W ARC19P33204 171 aaKnown RBP1.14□□□□□ -2.23
SEC28YIL076W TRM5P38793 499 aa1.14□□□□□ -2.23
SEC28YIL076W PEX17P40155 199 aa1.14□□□□□ -2.23
SEC28YIL076W DOC1P53068 250 aa1.14□□□□□ -2.23
SEC28YIL076W NSA1P53136 463 aaPredicted RBP1.14□□□□□ -2.23
SEC28YIL076W PRM8P53174 237 aa1.14□□□□□ -2.23
SEC28YIL076W GET1P53192 235 aa1.14□□□□□ -2.23
SEC28YIL076W ELP6Q04868 273 aa1.14□□□□□ -2.23
SEC28YIL076W RIB3Q99258 208 aa1.14□□□□□ -2.23
SEC28YIL076W REP2P03872 296 aa1.13□□□□□ -2.23
SEC28YIL076W RPL30P14120 105 aaKnown RBP1.13□□□□□ -2.23
SEC28YIL076W STE18P18852 110 aa1.13□□□□□ -2.23
SEC28YIL076W SUA7P29055 345 aaPredicted RBP1.13□□□□□ -2.23
SEC28YIL076W TFC1P32367 649 aa1.13□□□□□ -2.23
SEC28YIL076W NUF2P33895 451 aa1.13□□□□□ -2.23
SEC28YIL076W SRP102P36057 244 aaPredicted RBP1.13□□□□□ -2.23
SEC28YIL076W PDX3P38075 228 aaKnown RBP1.13□□□□□ -2.23
SEC28YIL076W RTT105P40063 208 aa1.13□□□□□ -2.23
SEC28YIL076W XPT1P47165 209 aa1.13□□□□□ -2.23
SEC28YIL076W CCC1P47818 322 aa1.13□□□□□ -2.23
SEC28YIL076W PGA1P53896 198 aa1.13□□□□□ -2.23
SEC28YIL076W YMD8Q03697 442 aa1.13□□□□□ -2.23
SEC28YIL076W GPI17Q04080 534 aa1.13□□□□□ -2.23
SEC28YIL076W CDC28P00546 298 aaKnown RBP1.12□□□□□ -2.23
SEC28YIL076W YHR212W-AP0CX91 67 aa1.12□□□□□ -2.23
SEC28YIL076W MRPS28P21771 286 aa1.12□□□□□ -2.23
SEC28YIL076W CPR5P35176 225 aa1.12□□□□□ -2.23
SEC28YIL076W IPT1P38954 527 aa1.12□□□□□ -2.23
SEC28YIL076W IRC22P40006 225 aa1.12□□□□□ -2.23
SEC28YIL076W DIG2Q03373 323 aaKnown RBP1.12□□□□□ -2.23
SEC28YIL076W YDR248CQ03786 193 aa1.12□□□□□ -2.23
SEC28YIL076W RFU1Q08003 200 aa1.12□□□□□ -2.23
SEC28YIL076W MPD1Q12404 318 aaKnown RBP1.12□□□□□ -2.23
SEC28YIL076W SPS18P32572 300 aa1.11□□□□□ -2.23
SEC28YIL076W CBT1P36038 271 aaPredicted RBP1.11□□□□□ -2.23
SEC28YIL076W ECM31P38122 312 aa1.11□□□□□ -2.23
SEC28YIL076W RIO2P40160 425 aaKnown RBP1.11□□□□□ -2.23
SEC28YIL076W YGL204CP53089 101 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms