RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C PRM7Q12459 698 aa9.95□□□□□ -0.82
SHU1YHL006C SFT2P38166 215 aa9.94□□□□□ -0.82
SHU1YHL006C PTC7P38797 343 aa9.94□□□□□ -0.82
SHU1YHL006C ORM1P53224 222 aa9.94□□□□□ -0.82
SHU1YHL006C IZH3Q07959 543 aa9.94□□□□□ -0.82
SHU1YHL006C SAR1P20606 190 aaKnown RBP9.93□□□□□ -0.82
SHU1YHL006C GNP1P48813 663 aa9.93□□□□□ -0.82
SHU1YHL006C YIP3P53633 176 aa9.93□□□□□ -0.82
SHU1YHL006C CTR3Q06686 241 aa9.93□□□□□ -0.82
SHU1YHL006C LSM2P38203 95 aaKnown RBP9.92□□□□□ -0.82
SHU1YHL006C YEA4P40004 342 aa9.92□□□□□ -0.82
SHU1YHL006C RPA14P50106 137 aa9.92□□□□□ -0.82
SHU1YHL006C UBC7Q02159 165 aa9.92□□□□□ -0.82
SHU1YHL006C YDR157WA0A023PZE8 133 aa9.91□□□□□ -0.82
SHU1YHL006C YDR215CQ12240 137 aa9.91□□□□□ -0.82
SHU1YHL006C PET100P38958 111 aa9.9□□□□□ -0.82
SHU1YHL006C BOL3P39724 118 aa9.9□□□□□ -0.82
SHU1YHL006C AIM24P47127 394 aa9.9□□□□□ -0.82
SHU1YHL006C YGL117WP53133 265 aa9.9□□□□□ -0.82
SHU1YHL006C YMR007WQ03675 126 aa9.9□□□□□ -0.82
SHU1YHL006C YMR244WQ04018 355 aa9.9□□□□□ -0.82
SHU1YHL006C YLR179CQ06252 201 aaKnown RBP9.9□□□□□ -0.82
SHU1YHL006C BER1Q06688 274 aaKnown RBP9.9□□□□□ -0.82
SHU1YHL006C YOL160WQ08321 113 aa9.9□□□□□ -0.82
SHU1YHL006C YNL146C-AQ3E7Z1 64 aa9.9□□□□□ -0.82
SHU1YHL006C YBL059WP34224 193 aa9.89□□□□□ -0.83
SHU1YHL006C SAS2P40963 338 aa9.89□□□□□ -0.83
SHU1YHL006C YDL242WQ07746 117 aa9.89□□□□□ -0.83
SHU1YHL006C TY1A-HP0C2I4 478 aaKnown RBP9.88□□□□□ -0.83
SHU1YHL006C TIR2P33890 251 aa9.88□□□□□ -0.83
SHU1YHL006C YIL077CP40508 320 aa9.88□□□□□ -0.83
SHU1YHL006C GCN3P14741 305 aa9.87□□□□□ -0.83
SHU1YHL006C CDC50P25656 391 aa9.87□□□□□ -0.83
SHU1YHL006C DER1P38307 211 aa9.87□□□□□ -0.83
SHU1YHL006C YNR071CP53757 342 aa9.87□□□□□ -0.83
SHU1YHL006C IZH1Q03419 316 aa9.87□□□□□ -0.83
SHU1YHL006C FCF2Q12035 217 aaPredicted RBP9.87□□□□□ -0.83
SHU1YHL006C PEX7P39108 375 aa9.86□□□□□ -0.83
SHU1YHL006C YER135CP40082 130 aa9.86□□□□□ -0.83
SHU1YHL006C TAD2P47058 250 aa9.86□□□□□ -0.83
SHU1YHL006C YGL194C-AQ2V2P6 80 aa9.86□□□□□ -0.83
SHU1YHL006C MRPS8Q03799 155 aa9.85□□□□□ -0.83
SHU1YHL006C ZRC1P20107 442 aa9.84□□□□□ -0.83
SHU1YHL006C SPO13P23624 291 aa9.84□□□□□ -0.83
SHU1YHL006C AHT1P29589 182 aa9.84□□□□□ -0.83
SHU1YHL006C EMP24P32803 203 aaKnown RBP9.84□□□□□ -0.83
SHU1YHL006C MIG3P39943 394 aa9.84□□□□□ -0.83
SHU1YHL006C AVO2Q04749 426 aa9.84□□□□□ -0.83
SHU1YHL006C STP4Q07351 490 aa9.84□□□□□ -0.83
SHU1YHL006C DDI2P0CH63 225 aa9.83□□□□□ -0.84
SHU1YHL006C DDI3P0CH64 225 aa9.83□□□□□ -0.84
SHU1YHL006C ANT1Q06497 328 aa9.83□□□□□ -0.84
SHU1YHL006C YPL162CQ12042 273 aa9.83□□□□□ -0.84
SHU1YHL006C QCR9P22289 66 aa9.82□□□□□ -0.84
SHU1YHL006C PHD1P36093 366 aa9.82□□□□□ -0.84
SHU1YHL006C YFR035CP43608 114 aa9.82□□□□□ -0.84
SHU1YHL006C MAG1P22134 296 aaKnown RBP9.81□□□□□ -0.84
SHU1YHL006C YNR066CP53752 436 aa9.8□□□□□ -0.84
SHU1YHL006C LOA1Q06508 300 aa9.8□□□□□ -0.84
SHU1YHL006C VMA22P38784 181 aa9.79□□□□□ -0.84
SHU1YHL006C PRE5P40302 234 aaKnown RBP9.79□□□□□ -0.84
SHU1YHL006C ASP1P38986 381 aaPredicted RBP9.78□□□□□ -0.84
SHU1YHL006C MBB1P39534 108 aa9.78□□□□□ -0.84
SHU1YHL006C DSK2P48510 373 aa9.78□□□□□ -0.84
SHU1YHL006C RPS2P25443 254 aaKnown RBP9.77□□□□□ -0.85
SHU1YHL006C MRPL50P53724 139 aa9.77□□□□□ -0.85
SHU1YHL006C MRPS17Q03246 237 aaPredicted RBP9.77□□□□□ -0.85
SHU1YHL006C FIT2Q08906 153 aa9.77□□□□□ -0.85
SHU1YHL006C YPR063CQ12160 140 aa9.77□□□□□ -0.85
SHU1YHL006C UBI4P0CG63 381 aaKnown RBP9.76□□□□□ -0.85
SHU1YHL006C MCM22P47167 239 aa9.76□□□□□ -0.85
SHU1YHL006C ATC1Q04005 294 aa9.76□□□□□ -0.85
SHU1YHL006C YPR145C-AQ2V2P0 78 aa9.76□□□□□ -0.85
SHU1YHL006C CYC7P00045 113 aa9.75□□□□□ -0.85
SHU1YHL006C GCV3P39726 170 aaPredicted RBP9.75□□□□□ -0.85
SHU1YHL006C RIB4P50861 169 aaPredicted RBP9.75□□□□□ -0.85
SHU1YHL006C YOR015WQ12169 119 aa9.75□□□□□ -0.85
SHU1YHL006C ERV2Q12284 196 aa9.75□□□□□ -0.85
SHU1YHL006C RPS11AP0CX47 156 aaKnown RBP9.74□□□□□ -0.85
SHU1YHL006C RPS11BP0CX48 156 aaKnown RBP9.74□□□□□ -0.85
SHU1YHL006C HSP12P22943 109 aaKnown RBP9.74□□□□□ -0.85
SHU1YHL006C HAL1Q01766 294 aa9.74□□□□□ -0.85
SHU1YHL006C ISU1Q03020 165 aa9.74□□□□□ -0.85
SHU1YHL006C RPB3P16370 318 aaKnown RBP9.73□□□□□ -0.85
SHU1YHL006C YCR001WP25347 104 aa9.73□□□□□ -0.85
SHU1YHL006C YHR022CP38763 256 aa9.73□□□□□ -0.85
SHU1YHL006C MRX11Q03079 207 aa9.73□□□□□ -0.85
SHU1YHL006C CCW12Q12127 133 aa9.73□□□□□ -0.85
SHU1YHL006C RPL2AP0CX45 254 aaKnown RBP9.72□□□□□ -0.85
SHU1YHL006C RPL2BP0CX46 254 aaKnown RBP9.72□□□□□ -0.85
SHU1YHL006C MRP2P10663 115 aaPredicted RBP9.72□□□□□ -0.85
SHU1YHL006C TRS20P38334 175 aa9.72□□□□□ -0.85
SHU1YHL006C SRB7P47822 140 aa9.72□□□□□ -0.85
SHU1YHL006C JAC1P53193 184 aa9.72□□□□□ -0.85
SHU1YHL006C SNX4P47057 423 aa9.71□□□□□ -0.86
SHU1YHL006C ADD37Q03233 198 aa9.71□□□□□ -0.86
SHU1YHL006C VAM10Q08474 114 aa9.71□□□□□ -0.86
SHU1YHL006C YBR292CP38357 123 aa9.7□□□□□ -0.86
SHU1YHL006C HUA1P40325 198 aa9.7□□□□□ -0.86
SHU1YHL006C CAF40P53829 373 aa9.7□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms