RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W CGI121Q03705 181 aaKnown RBP2.3□□□□□ -2.04
PTI1YGR156W YLR031WQ07978 186 aa2.3□□□□□ -2.04
PTI1YGR156W YOR283WQ12040 230 aaKnown RBP2.3□□□□□ -2.04
PTI1YGR156W MHT1Q12525 324 aa2.3□□□□□ -2.04
PTI1YGR156W YOR032W-AQ8TGS1 66 aa2.3□□□□□ -2.04
PTI1YGR156W HFA1P32874 2273 aa2.3□□□□□ -2.04
PTI1YGR156W TRX3P25372 127 aa2.29□□□□□ -2.04
PTI1YGR156W NVJ1P38881 321 aa2.29□□□□□ -2.04
PTI1YGR156W GIM4P40005 111 aaKnown RBP2.29□□□□□ -2.04
PTI1YGR156W LSM4P40070 187 aaKnown RBP2.29□□□□□ -2.04
PTI1YGR156W SER2P42941 309 aa2.29□□□□□ -2.04
PTI1YGR156W YGR219WP53307 113 aa2.29□□□□□ -2.04
PTI1YGR156W PRM15Q03262 622 aa2.29□□□□□ -2.04
PTI1YGR156W MRPS8Q03799 155 aa2.29□□□□□ -2.04
PTI1YGR156W SWC7Q06707 132 aa2.29□□□□□ -2.04
PTI1YGR156W FSF1Q12029 327 aaKnown RBP2.29□□□□□ -2.04
PTI1YGR156W CKS1P20486 150 aaKnown RBP2.28□□□□□ -2.04
PTI1YGR156W UTR5P32630 166 aa2.28□□□□□ -2.04
PTI1YGR156W YER076CP40049 302 aa2.28□□□□□ -2.04
PTI1YGR156W YKE4P40544 346 aa2.28□□□□□ -2.04
PTI1YGR156W MIX17Q03667 156 aa2.28□□□□□ -2.04
PTI1YGR156W HPT1Q04178 221 aaKnown RBP2.28□□□□□ -2.04
PTI1YGR156W MPD1Q12404 318 aaKnown RBP2.28□□□□□ -2.04
PTI1YGR156W ODC2Q99297 307 aa2.28□□□□□ -2.04
PTI1YGR156W YBR056W-AI2HB52 66 aa2.27□□□□□ -2.05
PTI1YGR156W UBC6P33296 250 aaPredicted RBP2.27□□□□□ -2.05
PTI1YGR156W SVP26P38869 228 aa2.27□□□□□ -2.05
PTI1YGR156W YEL073CP39974 107 aa2.27□□□□□ -2.05
PTI1YGR156W EFM5P53200 248 aaKnown RBP2.27□□□□□ -2.05
PTI1YGR156W GPI17Q04080 534 aa2.27□□□□□ -2.05
PTI1YGR156W NAT3Q06504 195 aa2.27□□□□□ -2.05
PTI1YGR156W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
PTI1YGR156W BRX1Q08235 291 aaKnown RBP2.27□□□□□ -2.05
PTI1YGR156W ATO3Q12359 275 aa2.27□□□□□ -2.05
PTI1YGR156W PEX4P29340 183 aa2.26□□□□□ -2.05
PTI1YGR156W SNC2P33328 115 aa2.26□□□□□ -2.05
PTI1YGR156W YKL102CP34249 101 aa2.26□□□□□ -2.05
PTI1YGR156W SHE2P36068 246 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
PTI1YGR156W ERV15P38312 142 aa2.26□□□□□ -2.05
PTI1YGR156W YEA4P40004 342 aa2.26□□□□□ -2.05
PTI1YGR156W RPL33BP41056 107 aaKnown RBP2.26□□□□□ -2.05
PTI1YGR156W BOL2P53082 120 aa2.26□□□□□ -2.05
PTI1YGR156W NUP49Q02199 472 aa2.26□□□□□ -2.05
PTI1YGR156W AIM34Q03673 198 aa2.26□□□□□ -2.05
PTI1YGR156W DYN3Q04949 312 aa2.26□□□□□ -2.05
PTI1YGR156W DGA1Q08650 418 aa2.26□□□□□ -2.05
PTI1YGR156W OCA6Q12454 224 aa2.26□□□□□ -2.05
PTI1YGR156W RAS2P01120 322 aaKnown RBP2.25□□□□□ -2.05
PTI1YGR156W YBR285WP38354 144 aa2.25□□□□□ -2.05
PTI1YGR156W FCY21P40039 528 aa2.25□□□□□ -2.05
PTI1YGR156W TIR3P40552 269 aa2.25□□□□□ -2.05
PTI1YGR156W CUP9P41817 306 aa2.25□□□□□ -2.05
PTI1YGR156W HSK3P69852 69 aa2.25□□□□□ -2.05
PTI1YGR156W YDR274CP87283 123 aa2.25□□□□□ -2.05
PTI1YGR156W SHH4Q06236 168 aa2.25□□□□□ -2.05
PTI1YGR156W DDI2P0CH63 225 aa2.24□□□□□ -2.05
PTI1YGR156W DDI3P0CH64 225 aa2.24□□□□□ -2.05
PTI1YGR156W YET1P35723 206 aa2.24□□□□□ -2.05
PTI1YGR156W AME1P38313 324 aa2.24□□□□□ -2.05
PTI1YGR156W YER134CP40081 178 aa2.24□□□□□ -2.05
PTI1YGR156W MPC3P53311 146 aa2.24□□□□□ -2.05
PTI1YGR156W NSL1Q12143 216 aa2.24□□□□□ -2.05
PTI1YGR156W YAR023CD6VPM8 179 aa2.23□□□□□ -2.05
PTI1YGR156W QCR2P07257 368 aa2.23□□□□□ -2.05
PTI1YGR156W PAN3P36102 679 aaPredicted RBP2.23□□□□□ -2.05
PTI1YGR156W AIM2P39721 246 aa2.23□□□□□ -2.05
PTI1YGR156W VTC1P40046 129 aaRIP-Chip data2.23□□□□□ -2.05 RIP-Chip
PTI1YGR156W YFL019CP43576 117 aa2.23□□□□□ -2.05
PTI1YGR156W YNR077CP53758 84 aa2.23□□□□□ -2.05
PTI1YGR156W YLR053CQ12026 108 aa2.23□□□□□ -2.05
PTI1YGR156W DAS2Q12084 232 aa2.23□□□□□ -2.05
PTI1YGR156W RDI1Q12434 202 aa2.23□□□□□ -2.05
PTI1YGR156W YLR412C-AQ3E742 68 aa2.23□□□□□ -2.05
PTI1YGR156W SEC14P24280 304 aaKnown RBP2.22□□□□□ -2.05
PTI1YGR156W YNL200CP40165 246 aaKnown RBP2.22□□□□□ -2.05
PTI1YGR156W YFR054CP43622 192 aa2.22□□□□□ -2.05
PTI1YGR156W YJL027CP47063 138 aaPredicted RBP2.22□□□□□ -2.05
PTI1YGR156W TMA22P47089 198 aaPredicted RBP2.22□□□□□ -2.05
PTI1YGR156W DAN1P47178 298 aa2.22□□□□□ -2.05
PTI1YGR156W RPL22BP56628 122 aaKnown RBP2.22□□□□□ -2.05
PTI1YGR156W YOL014WQ08110 124 aa2.22□□□□□ -2.05
PTI1YGR156W DGK1Q12382 290 aa2.22□□□□□ -2.05
PTI1YGR156W YPR014CQ6B0W2 109 aa2.22□□□□□ -2.05
PTI1YGR156W ATG40Q99325 256 aa2.22□□□□□ -2.05
PTI1YGR156W POR1P04840 283 aaKnown RBP2.21□□□□□ -2.06
PTI1YGR156W SPO13P23624 291 aa2.21□□□□□ -2.06
PTI1YGR156W YHR022CP38763 256 aa2.21□□□□□ -2.06
PTI1YGR156W NSG1P38837 291 aa2.21□□□□□ -2.06
PTI1YGR156W SOL1P50278 321 aa2.21□□□□□ -2.06
PTI1YGR156W YML100W-AQ8TGT0 57 aa2.21□□□□□ -2.06
PTI1YGR156W CMD1P06787 147 aaKnown RBP2.2□□□□□ -2.06
PTI1YGR156W PHO85P17157 305 aa2.2□□□□□ -2.06
PTI1YGR156W RPS27AP35997 82 aaKnown RBP2.2□□□□□ -2.06
PTI1YGR156W RPS27BP38711 82 aa2.2□□□□□ -2.06
PTI1YGR156W YNL217WP40152 326 aa2.2□□□□□ -2.06
PTI1YGR156W RFC2P40348 353 aa2.2□□□□□ -2.06
PTI1YGR156W GPI14P47088 403 aaKnown RBP2.2□□□□□ -2.06
PTI1YGR156W TTI2P47168 421 aa2.2□□□□□ -2.06
PTI1YGR156W CYT2Q00873 224 aa2.2□□□□□ -2.06
PTI1YGR156W YDL180WQ12301 547 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms