RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YPR063CQ12160 140 aa1.51□□□□□ -2.17
NIC96YFR002W URA5P13298 226 aaKnown RBP1.51□□□□□ -2.17
NIC96YFR002W SPO13P23624 291 aa1.51□□□□□ -2.17
NIC96YFR002W POP7P38291 140 aa1.51□□□□□ -2.17
NIC96YFR002W YER084WP40057 128 aa1.51□□□□□ -2.17
NIC96YFR002W SNX4P47057 423 aa1.51□□□□□ -2.17
NIC96YFR002W VPS68Q12016 184 aa1.51□□□□□ -2.17
NIC96YFR002W CDC8P00572 216 aa1.5□□□□□ -2.17
NIC96YFR002W UPS2P35200 230 aa1.5□□□□□ -2.17
NIC96YFR002W SKG1P36169 355 aa1.5□□□□□ -2.17
NIC96YFR002W RFC2P40348 353 aa1.5□□□□□ -2.17
NIC96YFR002W SER2P42941 309 aa1.5□□□□□ -2.17
NIC96YFR002W GPI14P47088 403 aaKnown RBP1.5□□□□□ -2.17
NIC96YFR002W TDA4P47153 279 aa1.5□□□□□ -2.17
NIC96YFR002W YGL088WP53151 121 aa1.5□□□□□ -2.17
NIC96YFR002W PLP1Q04004 230 aa1.5□□□□□ -2.17
NIC96YFR002W NAT3Q06504 195 aa1.5□□□□□ -2.17
NIC96YFR002W TSC3Q3E790 80 aa1.5□□□□□ -2.17
NIC96YFR002W ADH3P07246 375 aaKnown RBP1.5□□□□□ -2.17
NIC96YFR002W BUB2P26448 306 aaPredicted RBP1.5□□□□□ -2.17
NIC96YFR002W SFK1P35735 353 aa1.5□□□□□ -2.17
NIC96YFR002W MRPL17P36528 281 aa1.5□□□□□ -2.17
NIC96YFR002W IPI1P38803 334 aaPredicted RBP1.5□□□□□ -2.17
NIC96YFR002W YFL019CP43576 117 aa1.5□□□□□ -2.17
NIC96YFR002W YGL101WP53144 215 aa1.5□□□□□ -2.17
NIC96YFR002W ORM1P53224 222 aa1.5□□□□□ -2.17
NIC96YFR002W MZM1Q03429 123 aaPredicted RBP1.5□□□□□ -2.17
NIC96YFR002W MAK3Q03503 176 aa1.5□□□□□ -2.17
NIC96YFR002W YOL014WQ08110 124 aa1.5□□□□□ -2.17
NIC96YFR002W DAS2Q12084 232 aa1.5□□□□□ -2.17
NIC96YFR002W YDL180WQ12301 547 aa1.5□□□□□ -2.17
NIC96YFR002W DGK1Q12382 290 aa1.5□□□□□ -2.17
NIC96YFR002W SAS5Q99314 248 aa1.5□□□□□ -2.17
NIC96YFR002W TIM9O74700 87 aa1.49□□□□□ -2.17
NIC96YFR002W RPL2AP0CX45 254 aaKnown RBP1.49□□□□□ -2.17
NIC96YFR002W RPL2BP0CX46 254 aaKnown RBP1.49□□□□□ -2.17
NIC96YFR002W CPR5P35176 225 aa1.49□□□□□ -2.17
NIC96YFR002W CYC2P38909 366 aa1.49□□□□□ -2.17
NIC96YFR002W GIM4P40005 111 aaKnown RBP1.49□□□□□ -2.17
NIC96YFR002W TTI2P47168 421 aa1.49□□□□□ -2.17
NIC96YFR002W YGR042WP53227 271 aa1.49□□□□□ -2.17
NIC96YFR002W YPR014CQ6B0W2 109 aa1.49□□□□□ -2.17
NIC96YFR002W YML100W-AQ8TGT0 57 aa1.49□□□□□ -2.17
NIC96YFR002W VTC1P40046 129 aaRIP-Chip data1.49□□□□□ -2.17not detected
NIC96YFR002W AIF1P52923 378 aa1.49□□□□□ -2.17
NIC96YFR002W YDR274CP87283 123 aa1.49□□□□□ -2.17
NIC96YFR002W THI74Q04083 370 aa1.49□□□□□ -2.17
NIC96YFR002W CCW14O13547 238 aa1.48□□□□□ -2.17
NIC96YFR002W YEA4P40004 342 aa1.48□□□□□ -2.17
NIC96YFR002W YNL200CP40165 246 aaKnown RBP1.48□□□□□ -2.17
NIC96YFR002W YIL086CP40503 102 aa1.48□□□□□ -2.17
NIC96YFR002W YGL204CP53089 101 aa1.48□□□□□ -2.17
NIC96YFR002W YGR026WP53217 278 aa1.48□□□□□ -2.17
NIC96YFR002W LSM3P57743 89 aaKnown RBP1.48□□□□□ -2.17
NIC96YFR002W TMA20P89886 181 aaPredicted RBP1.48□□□□□ -2.17
NIC96YFR002W ATO3Q12359 275 aa1.48□□□□□ -2.17
NIC96YFR002W CCA1P21269 546 aa1.48□□□□□ -2.17
NIC96YFR002W IDP1P21954 428 aaKnown RBP1.48□□□□□ -2.17
NIC96YFR002W UTR5P32630 166 aa1.48□□□□□ -2.17
NIC96YFR002W VMA11P32842 164 aa1.48□□□□□ -2.17
NIC96YFR002W YKR032WP36127 104 aa1.48□□□□□ -2.17
NIC96YFR002W NSG1P38837 291 aa1.48□□□□□ -2.17
NIC96YFR002W AGE2P40529 298 aa1.48□□□□□ -2.17
NIC96YFR002W APQ12P40532 138 aa1.48□□□□□ -2.17
NIC96YFR002W YGR201CP42936 225 aa1.48□□□□□ -2.17
NIC96YFR002W MNN5P46982 586 aa1.48□□□□□ -2.17
NIC96YFR002W PKR1Q03880 122 aaKnown RBP1.48□□□□□ -2.17
NIC96YFR002W YMR320WQ04897 101 aa1.48□□□□□ -2.17
NIC96YFR002W CSF1Q12150 2958 aa1.48□□□□□ -2.17
NIC96YFR002W YAR023CD6VPM8 179 aa1.47□□□□□ -2.17
NIC96YFR002W RPL30P14120 105 aaKnown RBP1.47□□□□□ -2.17
NIC96YFR002W PAN3P36102 679 aaPredicted RBP1.47□□□□□ -2.17
NIC96YFR002W FYV4P38783 130 aaPredicted RBP1.47□□□□□ -2.17
NIC96YFR002W FEX1Q08913 375 aa1.47□□□□□ -2.17
NIC96YFR002W FEX2Q08991 375 aa1.47□□□□□ -2.17
NIC96YFR002W RIB3Q99258 208 aa1.47□□□□□ -2.17
NIC96YFR002W ODC2Q99297 307 aa1.47□□□□□ -2.17
NIC96YFR002W Q0297Q9ZZV8 51 aa1.47□□□□□ -2.17
NIC96YFR002W YHR180WP38868 163 aa1.47□□□□□ -2.17
NIC96YFR002W AIM2P39721 246 aa1.47□□□□□ -2.17
NIC96YFR002W GVP36P40531 326 aaKnown RBP1.47□□□□□ -2.17
NIC96YFR002W DSK2P48510 373 aa1.47□□□□□ -2.17
NIC96YFR002W MPC3P53311 146 aa1.47□□□□□ -2.17
NIC96YFR002W YDR476CQ03362 224 aa1.47□□□□□ -2.17
NIC96YFR002W YPR114WQ06107 315 aa1.47□□□□□ -2.17
NIC96YFR002W MSW1P04803 379 aa1.46□□□□□ -2.18
NIC96YFR002W MIG1P27705 504 aa1.46□□□□□ -2.18
NIC96YFR002W FCY21P40039 528 aa1.46□□□□□ -2.18
NIC96YFR002W YER134CP40081 178 aa1.46□□□□□ -2.18
NIC96YFR002W YJR015WP47090 510 aa1.46□□□□□ -2.18
NIC96YFR002W GTT2Q12390 233 aa1.46□□□□□ -2.18
NIC96YFR002W YLR412C-AQ3E742 68 aa1.46□□□□□ -2.18
NIC96YFR002W STP22P25604 385 aa1.46□□□□□ -2.18
NIC96YFR002W CUP9P41817 306 aa1.46□□□□□ -2.18
NIC96YFR002W FIP1P45976 327 aa1.46□□□□□ -2.18
NIC96YFR002W BUD13P46947 266 aaPredicted RBP1.46□□□□□ -2.18
NIC96YFR002W XPT1P47165 209 aa1.46□□□□□ -2.18
NIC96YFR002W YMR099CQ03161 297 aaKnown RBP1.46□□□□□ -2.18
NIC96YFR002W FYV12Q08559 129 aa1.46□□□□□ -2.18
NIC96YFR002W IRA2P19158 3079 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms