RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C CNB1P25296 175 aa8.52□□□□□ -1.05
VPS60YDR486C ACP1P32463 125 aa8.52□□□□□ -1.05
VPS60YDR486C YKL075CP36083 450 aa8.52□□□□□ -1.05
VPS60YDR486C PET100P38958 111 aa8.52□□□□□ -1.05
VPS60YDR486C LOC1P43586 204 aaPredicted RBP8.52□□□□□ -1.05
VPS60YDR486C TY1A-JR2P47099 440 aa8.52□□□□□ -1.05
VPS60YDR486C DSK2P48510 373 aa8.52□□□□□ -1.05
VPS60YDR486C YGR219WP53307 113 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-DR1Q03856 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-ML1Q04706 440 aaKnown RBP8.52□□□□□ -1.05
VPS60YDR486C TY1A-BRQ12217 440 aa8.52□□□□□ -1.05
VPS60YDR486C ERV2Q12284 196 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-NL2Q12470 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-GR2Q12485 440 aa8.52□□□□□ -1.05
VPS60YDR486C PET494P07390 489 aaPredicted RBP8.51□□□□□ -1.05
VPS60YDR486C VPS55P47111 140 aa8.51□□□□□ -1.05
VPS60YDR486C CPD1P53314 239 aa8.51□□□□□ -1.05
VPS60YDR486C SNO1Q03144 224 aa8.51□□□□□ -1.05
VPS60YDR486C SDH7Q04401 133 aa8.51□□□□□ -1.05
VPS60YDR486C RPS2P25443 254 aaKnown RBP8.5□□□□□ -1.05
VPS60YDR486C RPS0AP32905 252 aaKnown RBP8.5□□□□□ -1.05
VPS60YDR486C TRS20P38334 175 aa8.5□□□□□ -1.05
VPS60YDR486C HST4P53688 370 aa8.5□□□□□ -1.05
VPS60YDR486C HOR7Q05827 59 aa8.5□□□□□ -1.05
VPS60YDR486C MSA1Q08471 629 aa8.5□□□□□ -1.05
VPS60YDR486C TDH1P00360 332 aaKnown RBP8.49□□□□□ -1.05
VPS60YDR486C YHR213WP0CI67 198 aa8.49□□□□□ -1.05
VPS60YDR486C POP5P28005 173 aa8.49□□□□□ -1.05
VPS60YDR486C SFT2P38166 215 aa8.49□□□□□ -1.05
VPS60YDR486C POG1P40473 351 aa8.49□□□□□ -1.05
VPS60YDR486C YJL027CP47063 138 aaPredicted RBP8.49□□□□□ -1.05
VPS60YDR486C YMR181CQ03231 154 aa8.49□□□□□ -1.05
VPS60YDR486C AYT1Q12226 474 aa8.49□□□□□ -1.05
VPS60YDR486C CYC3P06182 269 aa8.48□□□□□ -1.05
VPS60YDR486C LSM2P38203 95 aaKnown RBP8.48□□□□□ -1.05
VPS60YDR486C IMD2P38697 523 aaKnown RBP8.48□□□□□ -1.05
VPS60YDR486C SNU13P39990 126 aaKnown RBP8.48□□□□□ -1.05
VPS60YDR486C TOS8P53147 276 aa8.48□□□□□ -1.05
VPS60YDR486C YNR071CP53757 342 aa8.48□□□□□ -1.05
VPS60YDR486C TIM18Q08749 192 aa8.48□□□□□ -1.05
VPS60YDR486C MIC12P38341 106 aa8.47□□□□□ -1.05
VPS60YDR486C CAB4P53332 305 aa8.47□□□□□ -1.05
VPS60YDR486C MOT3P54785 490 aaKnown RBP8.47□□□□□ -1.05
VPS60YDR486C YNK1P36010 153 aaKnown RBP8.46□□□□□ -1.06
VPS60YDR486C GLE2P40066 365 aa8.46□□□□□ -1.06
VPS60YDR486C PHS1P40857 217 aa8.46□□□□□ -1.06
VPS60YDR486C FIP1P45976 327 aa8.46□□□□□ -1.06
VPS60YDR486C IMP2P46972 177 aa8.46□□□□□ -1.06
VPS60YDR486C OCA2P53949 197 aa8.46□□□□□ -1.06
VPS60YDR486C LOA1Q06508 300 aa8.46□□□□□ -1.06
VPS60YDR486C SEC59P20048 519 aa8.45□□□□□ -1.06
VPS60YDR486C HSP12P22943 109 aaKnown RBP8.45□□□□□ -1.06
VPS60YDR486C RNA15P25299 296 aaPredicted RBP8.45□□□□□ -1.06
VPS60YDR486C BNS1P50084 137 aa8.45□□□□□ -1.06
VPS60YDR486C LDS2Q08218 356 aa8.45□□□□□ -1.06
VPS60YDR486C FIT2Q08906 153 aa8.45□□□□□ -1.06
VPS60YDR486C HMX1P32339 317 aa8.44□□□□□ -1.06
VPS60YDR486C YNL194CP40169 301 aa8.44□□□□□ -1.06
VPS60YDR486C POR2P40478 281 aa8.44□□□□□ -1.06
VPS60YDR486C RPS22AP0C0W1 130 aaKnown RBP8.43□□□□□ -1.06
VPS60YDR486C TY1A-LR4P0C2I8 440 aaKnown RBP8.43□□□□□ -1.06
VPS60YDR486C TY1A-DR6P0CX70 440 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-ER1P0CX71 440 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-LR2P0CX72 440 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-PLP0CX73 440 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-JR1P0CX74 440 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-LR3P0CX75 440 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-ML2P0CX76 440 aa8.43□□□□□ -1.06
VPS60YDR486C COQ3P27680 312 aa8.43□□□□□ -1.06
VPS60YDR486C LAC1P28496 418 aa8.43□□□□□ -1.06
VPS60YDR486C AFR1P33304 620 aa8.43□□□□□ -1.06
VPS60YDR486C YDL186WP48568 277 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-GR1Q12085 440 aa8.43□□□□□ -1.06
VPS60YDR486C MRPL23Q12487 163 aaPredicted RBP8.43□□□□□ -1.06
VPS60YDR486C YPR145C-AQ2V2P0 78 aa8.43□□□□□ -1.06
VPS60YDR486C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.43□□□□□ -1.06
VPS60YDR486C TY1A-OLQ92392 440 aaKnown RBP8.43□□□□□ -1.06
VPS60YDR486C NTF2P33331 125 aaKnown RBP8.42□□□□□ -1.06
VPS60YDR486C NCE103P53615 221 aa8.42□□□□□ -1.06
VPS60YDR486C MRX11Q03079 207 aa8.42□□□□□ -1.06
VPS60YDR486C DDI2P0CH63 225 aa8.41□□□□□ -1.06
VPS60YDR486C DDI3P0CH64 225 aa8.41□□□□□ -1.06
VPS60YDR486C YER190C-BP0CX94 160 aa8.41□□□□□ -1.06
VPS60YDR486C YEL077W-AP0CX95 160 aa8.41□□□□□ -1.06
VPS60YDR486C YGR296C-BP0CX96 160 aa8.41□□□□□ -1.06
VPS60YDR486C YPL283W-BP0CX97 160 aa8.41□□□□□ -1.06
VPS60YDR486C YPR204C-AP0CX98 160 aa8.41□□□□□ -1.06
VPS60YDR486C YFL068WP0CX99 160 aa8.41□□□□□ -1.06
VPS60YDR486C YLL066W-AP0CY00 160 aa8.41□□□□□ -1.06
VPS60YDR486C YLL067W-AP0CY01 160 aa8.41□□□□□ -1.06
VPS60YDR486C TIR2P33890 251 aa8.41□□□□□ -1.06
VPS60YDR486C NNK1P36003 928 aa8.41□□□□□ -1.06
VPS60YDR486C PRY2P36110 329 aa8.41□□□□□ -1.06
VPS60YDR486C ICS2P38284 255 aa8.41□□□□□ -1.06
VPS60YDR486C CYB5P40312 120 aa8.41□□□□□ -1.06
VPS60YDR486C YIL163CP40448 117 aa8.41□□□□□ -1.06
VPS60YDR486C TIM21P53220 239 aa8.41□□□□□ -1.06
VPS60YDR486C TIM11P81449 96 aaPredicted RBP8.41□□□□□ -1.06
VPS60YDR486C LAS17Q12446 633 aa8.41□□□□□ -1.06
VPS60YDR486C ADH3P07246 375 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms