RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W GEP4P38812 185 aa4.65□□□□□ -1.67
SIT4YDL047W YDR366CP87287 132 aa4.65□□□□□ -1.67
SIT4YDL047W YBR121C-AP0C5L4 52 aa4.64□□□□□ -1.67
SIT4YDL047W ARO2P28777 376 aaKnown RBP4.64□□□□□ -1.67
SIT4YDL047W UGX2P32772 223 aa4.64□□□□□ -1.67
SIT4YDL047W YRA2P36036 203 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
SIT4YDL047W MBA1P38300 278 aa4.64□□□□□ -1.67
SIT4YDL047W LAG1P38703 411 aa4.64□□□□□ -1.67
SIT4YDL047W GET2P40056 285 aa4.64□□□□□ -1.67
SIT4YDL047W YNL184CP53876 108 aa4.64□□□□□ -1.67
SIT4YDL047W ACT1P60010 375 aaKnown RBP4.64□□□□□ -1.67
SIT4YDL047W APS2Q00381 147 aa4.64□□□□□ -1.67
SIT4YDL047W GRH1Q04410 372 aaKnown RBP4.64□□□□□ -1.67
SIT4YDL047W IZH3Q07959 543 aa4.64□□□□□ -1.67
SIT4YDL047W MED7Q08278 222 aa4.64□□□□□ -1.67
SIT4YDL047W FSF1Q12029 327 aaKnown RBP4.64□□□□□ -1.67
SIT4YDL047W YDR215CQ12240 137 aa4.64□□□□□ -1.67
SIT4YDL047W YDL085C-AQ3E7B7 68 aaKnown RBP4.64□□□□□ -1.67
SIT4YDL047W VPS63O13549 108 aa4.63□□□□□ -1.67
SIT4YDL047W RPS28BP0C0X0 67 aaKnown RBP4.63□□□□□ -1.67
SIT4YDL047W YCR023CP25351 611 aa4.63□□□□□ -1.67
SIT4YDL047W ERV1P27882 189 aa4.63□□□□□ -1.67
SIT4YDL047W PDC2P32896 925 aa4.63□□□□□ -1.67
SIT4YDL047W YPC1P38298 316 aa4.63□□□□□ -1.67
SIT4YDL047W YHR138CP38841 114 aaPredicted RBP4.63□□□□□ -1.67
SIT4YDL047W YNL194CP40169 301 aa4.63□□□□□ -1.67
SIT4YDL047W MRPL49P40858 161 aaPredicted RBP4.63□□□□□ -1.67
SIT4YDL047W CAB5Q03941 241 aa4.63□□□□□ -1.67
SIT4YDL047W TSA2Q04120 196 aa4.63□□□□□ -1.67
SIT4YDL047W SHH3Q04487 196 aa4.63□□□□□ -1.67
SIT4YDL047W SCW10Q04951 389 aa4.63□□□□□ -1.67
SIT4YDL047W DPP1Q05521 289 aa4.63□□□□□ -1.67
SIT4YDL047W CNL1Q06333 122 aa4.63□□□□□ -1.67
SIT4YDL047W KEI1Q06346 221 aa4.63□□□□□ -1.67
SIT4YDL047W PBP4Q07362 185 aaKnown RBP4.63□□□□□ -1.67
SIT4YDL047W PAM18Q07914 168 aa4.63□□□□□ -1.67
SIT4YDL047W PRM4Q12498 284 aa4.63□□□□□ -1.67
SIT4YDL047W YGL194C-AQ2V2P6 80 aa4.63□□□□□ -1.67
SIT4YDL047W BOL1Q3E793 110 aa4.63□□□□□ -1.67
SIT4YDL047W RPS28AQ3E7X9 67 aaPredicted RBP4.63□□□□□ -1.67
SIT4YDL047W COA6Q3E846 104 aa4.63□□□□□ -1.67
SIT4YDL047W HAP3P13434 144 aa4.62□□□□□ -1.67
SIT4YDL047W MRS4P23500 304 aa4.62□□□□□ -1.67
SIT4YDL047W HOM6P31116 359 aaKnown RBP4.62□□□□□ -1.67
SIT4YDL047W MSK1P32048 576 aa4.62□□□□□ -1.67
SIT4YDL047W MRPL38P35996 138 aaPredicted RBP4.62□□□□□ -1.67
SIT4YDL047W PHD1P36093 366 aa4.62□□□□□ -1.67
SIT4YDL047W MPC2P38857 129 aa4.62□□□□□ -1.67
SIT4YDL047W YJR012CP47087 207 aa4.62□□□□□ -1.67
SIT4YDL047W UBP8P50102 471 aa4.62□□□□□ -1.67
SIT4YDL047W JAC1P53193 184 aa4.62□□□□□ -1.67
SIT4YDL047W YGR219WP53307 113 aa4.62□□□□□ -1.67
SIT4YDL047W ELC1Q03071 99 aa4.62□□□□□ -1.67
SIT4YDL047W LRS4Q04087 347 aaKnown RBP4.62□□□□□ -1.67
SIT4YDL047W YFH1Q07540 174 aa4.62□□□□□ -1.67
SIT4YDL047W RKI1Q12189 258 aa4.62□□□□□ -1.67
SIT4YDL047W TFB5Q3E7C1 72 aaPredicted RBP4.62□□□□□ -1.67
SIT4YDL047W PCC1Q3E833 88 aa4.62□□□□□ -1.67
SIT4YDL047W HUG1Q6Q5K6 68 aa4.62□□□□□ -1.67
SIT4YDL047W TY1A-LR4P0C2I8 440 aaKnown RBP4.61□□□□□ -1.67
SIT4YDL047W TY1A-DR6P0CX70 440 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-ER1P0CX71 440 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-LR2P0CX72 440 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-PLP0CX73 440 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-JR1P0CX74 440 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-LR3P0CX75 440 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-ML2P0CX76 440 aa4.61□□□□□ -1.67
SIT4YDL047W QDR3P38227 689 aa4.61□□□□□ -1.67
SIT4YDL047W ECM33P38248 429 aaKnown RBP4.61□□□□□ -1.67
SIT4YDL047W OXA1P39952 402 aa4.61□□□□□ -1.67
SIT4YDL047W ERG28P40030 148 aa4.61□□□□□ -1.67
SIT4YDL047W CDC40P40968 455 aaPredicted RBP4.61□□□□□ -1.67
SIT4YDL047W YGL185CP53100 379 aa4.61□□□□□ -1.67
SIT4YDL047W YDR274CP87283 123 aa4.61□□□□□ -1.67
SIT4YDL047W VPS28Q02767 242 aa4.61□□□□□ -1.67
SIT4YDL047W YML018CQ03730 393 aa4.61□□□□□ -1.67
SIT4YDL047W YLR224WQ05947 369 aa4.61□□□□□ -1.67
SIT4YDL047W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
SIT4YDL047W TY1A-GR1Q12085 440 aa4.61□□□□□ -1.67
SIT4YDL047W YJR112W-AQ3E743 109 aa4.61□□□□□ -1.67
SIT4YDL047W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.61□□□□□ -1.67
SIT4YDL047W TY1A-OLQ92392 440 aaKnown RBP4.61□□□□□ -1.67
SIT4YDL047W UBA3Q99344 299 aa4.61□□□□□ -1.67
SIT4YDL047W PUT1P09368 476 aa4.6□□□□□ -1.67
SIT4YDL047W NOP1P15646 327 aaKnown RBP4.6□□□□□ -1.67
SIT4YDL047W SEC22P22214 214 aa4.6□□□□□ -1.67
SIT4YDL047W TRR1P29509 319 aaKnown RBP4.6□□□□□ -1.67
SIT4YDL047W MIC12P38341 106 aa4.6□□□□□ -1.67
SIT4YDL047W DOG2P38773 246 aa4.6□□□□□ -1.67
SIT4YDL047W HTD2P38790 280 aaKnown RBP4.6□□□□□ -1.67
SIT4YDL047W SNU13P39990 126 aaKnown RBP4.6□□□□□ -1.67
SIT4YDL047W ATG18P43601 500 aa4.6□□□□□ -1.67
SIT4YDL047W DAN1P47178 298 aa4.6□□□□□ -1.67
SIT4YDL047W PHO23P50947 330 aa4.6□□□□□ -1.67
SIT4YDL047W CRH1P53301 507 aa4.6□□□□□ -1.67
SIT4YDL047W UBC7Q02159 165 aa4.6□□□□□ -1.67
SIT4YDL047W VBA1Q04301 562 aa4.6□□□□□ -1.67
SIT4YDL047W RRG8Q06109 277 aa4.6□□□□□ -1.67
SIT4YDL047W TDA6Q06466 467 aa4.6□□□□□ -1.67
SIT4YDL047W MET32Q12041 191 aa4.6□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms