RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	YHR214C-E	Q8TGK0	99 aa		4.4	□□□□□ -1.7
PDI1	YCL043C	ATG40	Q99325	256 aa		4.4	□□□□□ -1.7
PDI1	YCL043C	CYC7	P00045	113 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	ERG8	P24521	451 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	ERV1	P27882	189 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	LSM2	P38203	95 aa	Known RBP	4.4	□□□□□ -1.71
PDI1	YCL043C	QDR3	P38227	689 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	YIL012W	P40551	113 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	ECO1	P43605	281 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	HIT1	P46973	164 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	RPL21A	Q02753	160 aa	Known RBP	4.4	□□□□□ -1.71
PDI1	YCL043C	SDC1	Q03323	175 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	YDR209C	Q03480	137 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	NAT3	Q06504	195 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	NIP7	Q08962	181 aa	Known RBP	4.4	□□□□□ -1.71
PDI1	YCL043C	YPL264C	Q08980	353 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	RPL21B	Q12672	160 aa	Known RBP	4.4	□□□□□ -1.71
PDI1	YCL043C	YLR365W	Q7LIF2	110 aa		4.4	□□□□□ -1.71
PDI1	YCL043C	SEC4	P07560	215 aa	Known RBP	4.39	□□□□□ -1.71
PDI1	YCL043C	RPI1	P23250	407 aa	Known RBP	4.39	□□□□□ -1.71
PDI1	YCL043C	PCL1	P24867	279 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	MNS1	P32906	549 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	YBR220C	P38318	560 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	TEM1	P38987	245 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	CYB5	P40312	120 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	MSL1	P40567	111 aa	Predicted RBP	4.39	□□□□□ -1.71
PDI1	YCL043C	YJL028W	P47062	111 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	MSY1	P48527	492 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	YML079W	Q03629	201 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	PRP11	Q07350	266 aa	Predicted RBP	4.39	□□□□□ -1.71
PDI1	YCL043C	PAM18	Q07914	168 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	RDL1	Q12305	139 aa	Known RBP	4.39	□□□□□ -1.71
PDI1	YCL043C	SMT3	Q12306	101 aa	Known RBP	4.39	□□□□□ -1.71
PDI1	YCL043C	YLR363W-A	Q3E747	85 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	FLO9	P39712	1322 aa		4.39	□□□□□ -1.71
PDI1	YCL043C	PRP8	P33334	2413 aa	Known RBP	4.38	□□□□□ -1.71
PDI1	YCL043C	SWD2	P36104	329 aa	Predicted RBP	4.38	□□□□□ -1.71
PDI1	YCL043C	PRY1	P47032	299 aa		4.38	□□□□□ -1.71
PDI1	YCL043C	ATG4	P53867	494 aa		4.38	□□□□□ -1.71
PDI1	YCL043C	SNA4	Q07549	140 aa		4.38	□□□□□ -1.71
PDI1	YCL043C	YLR050C	Q12155	161 aa	Known RBP	4.38	□□□□□ -1.71
PDI1	YCL043C	YER190C-B	P0CX94	160 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	YEL077W-A	P0CX95	160 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	YGR296C-B	P0CX96	160 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	YPL283W-B	P0CX97	160 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	YPR204C-A	P0CX98	160 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	TIR1	P10863	254 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	SEC11	P15367	167 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	SRP21	P32342	167 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	DUO1	P53168	247 aa	Known RBP	4.37	□□□□□ -1.71
PDI1	YCL043C	YPR098C	Q06089	161 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	ARR3	Q06598	404 aa		4.37	□□□□□ -1.71
PDI1	YCL043C	RPL7B	Q12213	244 aa	Known RBP	4.37	□□□□□ -1.71
PDI1	YCL043C	LDB16	P25587	256 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	RAD23	P32628	398 aa	Known RBP	4.36	□□□□□ -1.71
PDI1	YCL043C	MIC27	P50945	234 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	YGL118C	P53132	145 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	CRH1	P53301	507 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	YPR108W-A	Q3E7B3	70 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	YCR024C-B	Q3E7Z8	88 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	NOP1	P15646	327 aa	Known RBP	4.36	□□□□□ -1.71
PDI1	YCL043C	HMX1	P32339	317 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	REC114	P32841	428 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	YBL059W	P34224	193 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	ECM33	P38248	429 aa	Known RBP	4.36	□□□□□ -1.71
PDI1	YCL043C	PSD1	P39006	500 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	COX15	P40086	486 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	YGR269W	P40326	108 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	SEC24	P40482	926 aa	Known RBP	4.36	□□□□□ -1.71
PDI1	YCL043C	YAR1	P46683	200 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	PCP1	P53259	346 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	GRH1	Q04410	372 aa	Known RBP	4.36	□□□□□ -1.71
PDI1	YCL043C	RIM9	Q04734	239 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	LDS2	Q08218	356 aa		4.36	□□□□□ -1.71
PDI1	YCL043C	SOD1	P00445	154 aa	Known RBP	4.35	□□□□□ -1.71
PDI1	YCL043C	CDC36	P06100	191 aa	Predicted RBP	4.35	□□□□□ -1.71
PDI1	YCL043C	RPS16A	P0CX51	143 aa	Known RBP	4.35	□□□□□ -1.71
PDI1	YCL043C	RPS16B	P0CX52	143 aa	Known RBP	4.35	□□□□□ -1.71
PDI1	YCL043C	HMRA1	P0CY11	126 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	NNK1	P36003	928 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	YKR070W	P36151	352 aa	Known RBP	4.35	□□□□□ -1.71
PDI1	YCL043C	CTK2	P46962	323 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	COX18	P53239	316 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	YNR071C	P53757	342 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	ELC1	Q03071	99 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	SCW10	Q04951	389 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	COX17	Q12287	69 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	ATO3	Q12359	275 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	WIP1	Q2V2P8	89 aa		4.35	□□□□□ -1.71
PDI1	YCL043C	YOR304C-A	O14468	76 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	YLL053C	P0CD98	152 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	RPB7	P34087	171 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	SRP14	P38985	146 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	SNU13	P39990	126 aa	Known RBP	4.34	□□□□□ -1.71
PDI1	YCL043C	ATF1	P40353	525 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	PRM5	P40476	318 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	DFG10	P40526	253 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	YJR015W	P47090	510 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	CAB4	P53332	305 aa		4.34	□□□□□ -1.71
PDI1	YCL043C	DIA1	P54005	336 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms