RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ACTN3Q08043 901 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 CCDC15Q0P6D6 951 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 USP10Q14694 798 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 DEPDC1Q5TB30 811 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KHDRBS2Q5VWX1 349 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 STYK1Q6J9G0 422 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TPCN2Q8NHX9 752 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 B4GALNT2Q8NHY0 566 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ATXN7L3BQ96GX2 97 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 DNAJC7Q99615 494 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 UBE2OQ9C0C9 1292 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 SIK2Q9H0K1 926 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MUC3BQ9H195 1237 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SPATA31D1Q6ZQQ2 1576 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 LTN1O94822 1766 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TMEM120BA0PK00 339 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SERPINI2O75830 405 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 GYPCP04921 128 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MYBP10242 640 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TXNP10599 105 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 COILP38432 576 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 ANXA11P50995 505 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 ITGA8P53708 1063 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 RUNX1T1Q06455 604 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 WDR72Q3MJ13 1102 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KLHDC7AQ5VTJ3 777 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 UNC45BQ8IWX7 931 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 VPS37AQ8NEZ2 397 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 C10orf88Q9H8K7 445 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PKP3Q9Y446 797 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MYH7P12883 1935 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SNTNA6NMZ2 147 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ATP9BO43861 1147 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PDHBP11177 359 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PSMA3P25788 255 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 VCPP55072 806 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 SESN2P58004 480 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 ST8SIA6P61647 398 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MTFR1Q15390 333 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 FAM83EQ2M2I3 478 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 CLEC4FQ8N1N0 589 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ZFYVE19Q96K21 471 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SPON2Q9BUD6 331 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KLHL11Q9NVR0 708 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ERAP1Q9NZ08 941 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 CLCA2Q9UQC9 943 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 AP4S1Q9Y587 144 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 AGLP35573 1532 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PRR23D1E9PI22 279 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 FOXN1O15353 648 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 LSM8O95777 96 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 ATP5BP06576 529 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 PRR23D2P0DMB1 279 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 VHLP40337 213 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.76□□□□□ -1.65
CHD9-221ENST00000615216 SF3B3Q15393 1217 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 C3orf62Q6ZUJ4 267 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 THAP11Q96EK4 314 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ZNRF3Q9ULT6 936 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 AGAP1Q9UPQ3 857 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ADGRB2O60241 1585 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 NCOA3Q9Y6Q9 1424 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MYH3P11055 1940 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KBTBD13C9JR72 458 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MOCS2O96007 188 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 COMTP21964 271 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 AKT1P31749 480 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 CYLC2Q14093 348 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 ARHGEF7Q14155 803 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MTF1Q14872 753 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 DGKDQ16760 1214 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 RABGAP1LQ5R372 815 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ACAD10Q6JQN1 1059 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TC2NQ8N9U0 490 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PRPF18Q99633 342 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 MXRA8Q9BRK3 442 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TBX20Q9UMR3 447 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 HLA-DRAP01903 254 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 FCGR1AP12314 374 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 GARTP22102 1010 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 RPA1P27694 616 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SPP2Q13103 211 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PTGISQ16647 500 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 CACHD1Q5VU97 1274 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 BBS7Q8IWZ6 715 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 NUP93Q8N1F7 819 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SLC30A5Q8TAD4 765 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PLEKHA8Q96JA3 519 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 FAM167BQ9BTA0 163 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TRPC7Q9HCX4 862 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 DAGLAQ9Y4D2 1042 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TADA2AO75478 443 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SOAT2O75908 522 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 WEE2P0C1S8 567 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 PRLRP16471 622 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 RPS12P25398 132 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 SKOR1P84550 965 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 AGAP9Q5VTM2 703 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TIGD7Q6NT04 549 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 DDX53Q86TM3 631 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms