RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 CBWD6Q4V339 395 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 CBWD3Q5JTY5 395 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 CBWD5Q5RIA9 395 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 KRT39Q6A163 491 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 GRASPQ7Z6J2 395 aaPredicted RBP21.5■■□□□ 1.03
SSBP4-210ENST00000601444 FRMD5Q7Z6J6 570 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 SEMA4DQ92854 862 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 SLC35C1Q96A29 364 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 NECTIN4Q96NY8 510 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 ACBD6Q9BR61 282 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 SDCBP2Q9H190 292 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 SMYD3Q9H7B4 428 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 HCFC1R1Q9NWW0 138 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 PRKAG3Q9UGI9 489 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 INSL5Q9Y5Q6 135 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 C19orf67A6NJJ6 358 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 ASS1P00966 412 aaKnown RBP21.49■■□□□ 1.03
SSBP4-210ENST00000601444 WARSP23381 471 aaKnown RBP21.49■■□□□ 1.03
SSBP4-210ENST00000601444 HOXA9P31269 272 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 GTF2H1P32780 548 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 MYL7Q01449 175 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 ZNF667Q5HYK9 610 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 SCARA5Q6ZMJ2 495 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 PKMYT1Q99640 499 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 LPIN3Q9BQK8 851 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 APOBEC3GQ9HC16 384 aaKnown RBP21.49■■□□□ 1.03
SSBP4-210ENST00000601444 WDR6Q9NNW5 1121 aaKnown RBP21.49■■□□□ 1.03
SSBP4-210ENST00000601444 TMEM63CQ9P1W3 806 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 GTF3C4Q9UKN8 822 aa21.49■■□□□ 1.03
SSBP4-210ENST00000601444 C2orf16Q68DN1 1984 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 MYBPHLA2RUH7 354 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 TACC1O75410 805 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 MXI1P50539 228 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 PSMC1P62191 440 aaKnown RBP21.48■■□□□ 1.03
SSBP4-210ENST00000601444 TWF1Q12792 350 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 INTS6LQ5JSJ4 861 aaKnown RBP21.48■■□□□ 1.03
SSBP4-210ENST00000601444 CYP26C1Q6V0L0 522 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 GJD3Q8N144 294 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 OR6B3Q8NGW1 331 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 SPATA18Q8TC71 538 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 RHOBTB2Q9BYZ6 727 aa21.48■■□□□ 1.03
SSBP4-210ENST00000601444 METTL14Q9HCE5 456 aaKnown RBP21.48■■□□□ 1.03
SSBP4-210ENST00000601444 DNMT3BQ9UBC3 853 aaKnown RBP21.48■■□□□ 1.03
SSBP4-210ENST00000601444 LOC730098B7Z3J9 87 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 LRG1P02750 347 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 SSTR3P32745 418 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-210ENST00000601444 GNL1P36915 607 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-210ENST00000601444 TSPY1Q01534 308 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 CCDC183Q5T5S1 534 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 RTL10Q7L3V2 364 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 DCP1BQ8IZD4 617 aaKnown RBP21.47■■□□□ 1.03
SSBP4-210ENST00000601444 TAF4BQ92750 862 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 SNX25Q9H3E2 840 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 DPEP3Q9H4B8 488 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 CRTAC1Q9NQ79 661 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 ABI2Q9NYB9 513 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-210ENST00000601444 CEP72Q9P209 647 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 MAFFQ9ULX9 164 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 YIPF1Q9Y548 306 aa21.47■■□□□ 1.03
SSBP4-210ENST00000601444 C2CD4DB7Z1M9 353 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 STX10O60499 249 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 N4BP1O75113 896 aaKnown RBP21.46■■□□□ 1.03
SSBP4-210ENST00000601444 XYLBO75191 536 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 PCSK1P29120 753 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 ASPAP45381 313 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 IRF2BP1Q8IU81 584 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 FBXL13Q8NEE6 735 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 SYT15Q9BQS2 421 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 RAB20Q9NX57 234 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 CLUHO75153 1309 aa21.46■■□□□ 1.03
SSBP4-210ENST00000601444 MUC3AQ02505 3323 aa21.45■■□□□ 1.03
SSBP4-210ENST00000601444 DLL1O00548 723 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 POU2F2P09086 479 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 FAM163BP0C2L3 166 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 MARSP56192 900 aaKnown RBP21.45■■□□□ 1.02
SSBP4-210ENST00000601444 NOP14P78316 857 aaKnown RBP21.45■■□□□ 1.02
SSBP4-210ENST00000601444 MGAT5BQ3V5L5 792 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 FAM171BQ6P995 826 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 CREBRFQ8IUR6 639 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 TRIM59Q8IWR1 403 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 KHSRPQ92945 711 aaKnown RBP eCLIP21.45■■□□□ 1.02
SSBP4-210ENST00000601444 SEPT5Q99719 369 aaPredicted RBP21.45■■□□□ 1.02
SSBP4-210ENST00000601444 DNAJC25Q9H1X3 360 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 CDH9Q9ULB4 789 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 PCDHB5Q9Y5E4 795 aa21.45■■□□□ 1.02
SSBP4-210ENST00000601444 A8MXQ7 604 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 NRG2O14511 850 aaPredicted RBP21.44■■□□□ 1.02
SSBP4-210ENST00000601444 GNA14O95837 355 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 FMO5P49326 533 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 CAVIN1Q6NZI2 390 aaKnown RBP21.44■■□□□ 1.02
SSBP4-210ENST00000601444 HS6ST3Q8IZP7 471 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 TATDN2Q93075 761 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 CORO1BQ9BR76 489 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 IMPG2Q9BZV3 1241 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 COQ4Q9Y3A0 265 aa21.44■■□□□ 1.02
SSBP4-210ENST00000601444 FGFR1OPO95684 399 aaKnown RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 RHOP08100 348 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 HAPLN1P10915 354 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 PTPN2P17706 415 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 ATF6P18850 670 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms