RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RTL1A6NKG5 1358 aa4.61□□□□□ -1.67
CKS1BP3-201ENST00000600888 TNS2Q63HR2 1409 aa4.61□□□□□ -1.67
CKS1BP3-201ENST00000600888 QSER1Q2KHR3 1735 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 NPIPB8E9PQR5 432 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 ZNF185O15231 689 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 GRM6O15303 877 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 DTNBO60941 627 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 ITGB1P05556 798 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 SBK3P0C264 359 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 MTHFD1P11586 935 aaKnown RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 ALAS1P13196 640 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 MALP21145 153 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC6A2P23975 617 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 CYP2C19P33261 490 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 FAM189BP81408 668 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 SNAPC2Q13487 334 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 NFE2Q16621 373 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 PGS1Q32NB8 556 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 PABPC1LQ4VXU2 614 aaKnown RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 PDCD4Q53EL6 469 aaKnown RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 ATAT1Q5SQI0 421 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 THEMIS2Q5TEJ8 643 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 FNDC7Q5VTL7 733 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 AGAP9Q5VTM2 703 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 TSHZ3Q63HK5 1081 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 TPH2Q8IWU9 490 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 ZFPM1Q8IX07 1006 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 ZNF276Q8N554 614 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 C3orf20Q8ND61 904 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 NLGN4YQ8NFZ3 816 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC25A43Q8WUT9 341 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 JDP2Q8WYK2 163 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 HPS3Q969F9 1004 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 MVB12AQ96EY5 273 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC46A2Q9BY10 475 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 TEX101Q9BY14 249 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 MAN1C1Q9NR34 630 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC2A4RGQ9NR83 387 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 G3BP2Q9UN86 482 aaKnown RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 POLHQ9Y253 713 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 USP15Q9Y4E8 981 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 LY75O60449 1722 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 PKD1L3Q7Z443 1732 aa4.6□□□□□ -1.67
CKS1BP3-201ENST00000600888 LRRC14BA6NHZ5 514 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 EXOC5O00471 708 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC16A6O15403 523 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 NARSO43776 548 aaKnown RBP4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 RPS6KA4O75676 772 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 PRSS23O95084 383 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 ITGB4P16144 1822 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 NR4A1P22736 598 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 GCSHP23434 173 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 HOXC9P31274 260 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 NCAPD2Q15021 1401 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 LRRC41Q15345 812 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 MAP3K19Q56UN5 1328 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 IFIT1BQ5T764 474 aaKnown RBP4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 RHOT2Q8IXI1 618 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 Q8N1X5 172 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 FITM2Q8N6M3 262 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 DOT1LQ8TEK3 1739 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 HAS1Q92839 578 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 MAP3K14Q99558 947 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 REXO4Q9GZR2 422 aaKnown RBP4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 GPRC5BQ9NZH0 403 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 ATP11BQ9Y2G3 1177 aa4.59□□□□□ -1.67
CKS1BP3-201ENST00000600888 VIRMAQ69YN4 1812 aaKnown RBP4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 CASZ1Q86V15 1759 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 COL24A1Q17RW2 1714 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 NSD3Q9BZ95 1437 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 INSRP06213 1382 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 FLT4P35916 1363 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 PLEKHG2Q9H7P9 1386 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 CGNL1Q0VF96 1302 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 GAGE12BA1L429 117 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 GAGE12HA6NDE8 117 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 F2RL2O00254 374 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 RNASET2O00584 256 aaKnown RBP4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 AP1G1O43747 822 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 OFD1O75665 1012 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 NCR1O76036 304 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 HAUS5O94927 633 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 ARIH2O95376 493 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 SPATA31D3P0C874 917 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 CKBP12277 381 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 C6P13671 934 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 TACR2P21452 398 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 SMARCA1P28370 1054 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 SLC6A4P31645 630 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 MAP2K6P52564 334 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 HK3P52790 923 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZXDAP98168 799 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 GTF2H3Q13889 308 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 PPP2R5AQ15172 486 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 EZH2Q15910 746 aaKnown RBP4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 IGFL4Q6B9Z1 124 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 SPATA31D4Q6ZUB0 917 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 GRAMD1CQ8IYS0 662 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms