RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 IL18RAPO95256 599 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 KRT18P05783 430 aaKnown RBP7.43□□□□□ -1.22
SPG11-224ENST00000561268 MYBP10242 640 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 ODC1P11926 461 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 CEBPBP17676 345 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 HOXD13P35453 343 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 ACOT2P49753 483 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 ZNF75DP51815 510 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 SPAG1Q07617 926 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 IQCB1Q15051 598 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 POSTNQ15063 836 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 BMT2Q1RMZ1 405 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 PARM1Q6UWI2 310 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 SV2BQ7L1I2 683 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 DYMQ7RTS9 669 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 LIMS2Q7Z4I7 341 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 CREBRFQ8IUR6 639 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 SIX5Q8N196 739 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 OR10T2Q8NGX3 314 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 RASSF8Q8NHQ8 419 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 GPR152Q8TDT2 470 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 DNASE1L2Q92874 299 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 ASB16Q96NS5 453 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 PKMYT1Q99640 499 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 MKNK1Q9BUB5 465 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 RPP25Q9BUL9 199 aaKnown RBP7.43□□□□□ -1.22
SPG11-224ENST00000561268 TRPV5Q9NQA5 729 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 CEP72Q9P209 647 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 MYO18AQ92614 2054 aaKnown RBP7.43□□□□□ -1.22
SPG11-224ENST00000561268 CEP192Q8TEP8 1941 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 GOLGA6L19H0YKK7 550 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 IKBKBO14920 756 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 NRDCO43847 1150 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 GCNT3O95395 438 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 LDHAP00338 332 aaKnown RBP7.42□□□□□ -1.22
SPG11-224ENST00000561268 LRG1P02750 347 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 CPB1P15086 417 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 WEE1P30291 646 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 TAF6P49848 677 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 PRKCQQ04759 706 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ADCY1Q08828 1119 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 SMARCB1Q12824 385 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 SNW1Q13573 536 aaKnown RBP7.42□□□□□ -1.22
SPG11-224ENST00000561268 STK38Q15208 465 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ANO6Q4KMQ2 910 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 FOXD4L5Q5VV16 416 aaPredicted RBP7.42□□□□□ -1.22
SPG11-224ENST00000561268 RESP18Q5W5W9 173 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 OVOS1Q6IE37 1185 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 CENPPQ6IPU0 288 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 C12orf56Q8IXR9 622 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 CEP57L1Q8IYX8 460 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 TTC9BQ8N6N2 239 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 LRRC52Q8N7C0 313 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 C1orf127Q8N9H9 656 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 GLIS3Q8NEA6 775 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ZSWIM2Q8NEG5 633 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 PJA1Q8NG27 643 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 TMEM174Q8WUU8 243 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 FOXD4L4Q8WXT5 416 aaPredicted RBP7.42□□□□□ -1.22
SPG11-224ENST00000561268 POMGNT1Q8WZA1 660 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ANKRD7Q92527 254 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ELSPBP1Q96BH3 223 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 TCEAL4Q96EI5 215 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 SENP8Q96LD8 212 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ZNF560Q96MR9 790 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ACCSQ96QU6 501 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 CBWD1Q9BRT8 395 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 OSBPL6Q9BZF3 934 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 ZCWPW1Q9H0M4 648 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 MRPL44Q9H9J2 332 aaKnown RBP7.42□□□□□ -1.22
SPG11-224ENST00000561268 TBC1D17Q9HA65 648 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 CBX8Q9HC52 389 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 GDAP2Q9NXN4 497 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 SIX4Q9UIU6 781 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 DSEQ9UL01 958 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 EXOC7Q9UPT5 735 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 PTPRJQ12913 1337 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 DCHS1Q96JQ0 3298 aa7.42□□□□□ -1.22
SPG11-224ENST00000561268 PRRG1O14668 218 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 ZNF197O14709 1029 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 PI15O43692 258 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 ACTN4O43707 911 aaKnown RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 EXTL3O43909 919 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 CFHP08603 1231 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 OR4Q2P0C623 313 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 GLULP15104 373 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 PTPN2P17706 415 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 ATF6P18850 670 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 PNPLA4P41247 253 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 MATR3P43243 847 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPG11-224ENST00000561268 MAGEA9P43362 315 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 TPM4P67936 248 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 CEBPZQ03701 1054 aaKnown RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 FCHO2Q0JRZ9 810 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 TWF1Q12792 350 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 PLD1Q13393 1074 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 MLF2Q15773 248 aaPredicted RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 SV2CQ496J9 727 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms