RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 POLIQ9UNA4 740 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 CEP83Q9Y592 693 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 SNX9Q9Y5X1 595 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 DUSP10Q9Y6W6 482 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 TSC2P49815 1807 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 MIF4GDA9UHW6 222 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PPEF2O14830 753 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 OAZ2O95190 189 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 TCP1P17987 556 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PCSK1P29120 753 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 CASQ1P31415 396 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 MAN1A1P33908 653 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 USP8P40818 1118 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 NSFP46459 744 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SCNN1GP51170 649 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 NDST1P52848 882 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PLCB3Q01970 1234 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 ELAVL2Q12926 359 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 IKBKEQ14164 716 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 ACAP1Q15027 740 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 CLUL1Q15846 466 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 GLRA4Q5JXX5 417 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 ZNF569Q5MCW4 686 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 TMEM110Q86TL2 294 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PDCL2Q8N4E4 241 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 WDTC1Q8N5D0 677 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 NIPA2Q8N8Q9 360 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 ANKRD52Q8NB46 1076 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 MSANTD4Q8NCY6 345 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SLC35G2Q8TBE7 412 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PAWRQ96IZ0 340 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 RPGRIP1Q96KN7 1286 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SENP8Q96LD8 212 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 HSFY1Q96LI6 401 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 CEP295NLQ96MC4 621 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 CASD1Q96PB1 797 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 ACBD6Q9BR61 282 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PACSIN1Q9BY11 444 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 RC3H2Q9HBD1 1191 aaKnown RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PNPLA8Q9NP80 782 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 KLK14Q9P0G3 267 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 CDC23Q9UJX2 597 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 TTC7AQ9ULT0 858 aaPredicted RBP11.56□□□□□ -0.56
PABPN1-203ENST00000553960 PCDHB7Q9Y5E2 793 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 SCINQ9Y6U3 715 aa11.56□□□□□ -0.56
PABPN1-203ENST00000553960 COL4A4P53420 1690 aaPredicted RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 SCN5AQ14524 2016 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 A0A0U1RQJ8 604 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 THAP12O43422 761 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 GNL1P36915 607 aaPredicted RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 SLC1A1P43005 524 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 GUCY2FP51841 1108 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 CDH8P55286 799 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 SMARCB1Q12824 385 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 MRPL58Q14197 206 aaKnown RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 MAPRE1Q15691 268 aaKnown RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 LRRC26Q2I0M4 334 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 MEI1Q5TIA1 1274 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 LIN9Q5TKA1 542 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 FAM171BQ6P995 826 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 SLC35F6Q8N357 371 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 C1orf131Q8NDD1 294 aaKnown RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 ATRIPQ8WXE1 791 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 ZNF689Q96CS4 500 aaPredicted RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 MCRS1Q96EZ8 462 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 CYFIP2Q96F07 1278 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 HES6Q96HZ4 224 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TWNKQ96RR1 684 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 PKMYT1Q99640 499 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 NCAPGQ9BPX3 1015 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 APOL6Q9BWW8 343 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TLR10Q9BXR5 811 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 IRX2Q9BZI1 471 aaPredicted RBP11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TMEM39AQ9NV64 488 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 PARVAQ9NVD7 372 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TBC1D13Q9NVG8 400 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 TAS2R14Q9NYV8 317 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 CDH9Q9ULB4 789 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 MRFAP1Q9Y605 127 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 CAPN6Q9Y6Q1 641 aa11.55□□□□□ -0.56
PABPN1-203ENST00000553960 BRCA2P51587 3418 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 GRID2IPA4D2P6 1211 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 CYB561D2O14569 222 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 DGKIO75912 1065 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 ODC1P11926 461 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 ACADSBP45954 432 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 CLCNKBP51801 687 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms