RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GPR158Q5T848 1215 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 VITQ6UXI7 678 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 FOXD4L3Q6VB84 417 aaPredicted RBP10.07□□□□□ -0.8
YBX3-218ENST00000546298 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 GAREM2Q75VX8 874 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 LRRTM3Q86VH5 581 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 ARID3BQ8IVW6 561 aaPredicted RBP10.07□□□□□ -0.8
YBX3-218ENST00000546298 CEP57L1Q8IYX8 460 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 PDCL2Q8N4E4 241 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 TTC9BQ8N6N2 239 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 TOP6BLQ8N6T0 577 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 ZNF507Q8TCN5 953 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 CSGALNACT1Q8TDX6 532 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 CLDN23Q96B33 292 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 MSANTD3Q96H12 275 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 FGFBP2Q9BYJ0 223 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 TASP1Q9H6P5 420 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 ZNF334Q9HCZ1 680 aaPredicted RBP10.07□□□□□ -0.8
YBX3-218ENST00000546298 ABCB6Q9NP58 842 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 INTS13Q9NVM9 706 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 ABI2Q9NYB9 513 aaPredicted RBP10.07□□□□□ -0.8
YBX3-218ENST00000546298 CGNQ9P2M7 1197 aaKnown RBP10.07□□□□□ -0.8
YBX3-218ENST00000546298 FBXO4Q9UKT5 387 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 PCDHA7Q9UN72 937 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 SNX9Q9Y5X1 595 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 UBE4BO95155 1302 aa10.07□□□□□ -0.8
YBX3-218ENST00000546298 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 CHADO15335 359 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 LRRN2O75325 713 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 SOAT2O75908 522 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 SP9P0CG40 484 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 CSH1P0DML2 217 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 CSH2P0DML3 217 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 CD72P21854 359 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 TARSP26639 723 aaKnown RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 WNT7BP56706 349 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 PLCB2Q00722 1185 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 ZNF528Q3MIS6 628 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 ARHGAP29Q52LW3 1261 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 RESP18Q5W5W9 173 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 ASCL5Q7RTU5 278 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 CBWD2Q8IUF1 395 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 WDR49Q8IV35 697 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 ZSWIM2Q8NEG5 633 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 LEO1Q8WVC0 666 aaPredicted RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 FAM3CQ92520 227 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 HPDLQ96IR7 371 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 FNBP1Q96RU3 617 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 LPIN3Q9BQK8 851 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 IER2Q9BTL4 223 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 C8orf33Q9H7E9 229 aaPredicted RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 DDX43Q9NXZ2 648 aaKnown RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 HSPBP1Q9NZL4 362 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 RCOR1Q9UKL0 485 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 MTF2Q9Y483 593 aaPredicted RBP10.06□□□□□ -0.8
YBX3-218ENST00000546298 PIAS3Q9Y6X2 628 aa10.06□□□□□ -0.8
YBX3-218ENST00000546298 PTPRZ1P23471 2315 aaPredicted RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 C2orf16Q68DN1 1984 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 NRG2O14511 850 aaPredicted RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 FAM163BP0C2L3 166 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 SLFN14P0C7P3 912 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 ATF6P18850 670 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 DDX6P26196 483 aaKnown RBP eCLIP10.05□□□□□ -0.8
YBX3-218ENST00000546298 AFMP43652 599 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 KPNA1P52294 538 aaPredicted RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 PPP2R5DQ14738 602 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 MAPRE1Q15691 268 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 SNRNP35Q16560 246 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 INTS6LQ5JSJ4 861 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 SPATA2LQ8IUW3 424 aaPredicted RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 ADGRF2Q8IZF7 708 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 ADSSL1Q8N142 457 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 CELF5Q8N6W0 485 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 XXYLT1Q8NBI6 393 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 CXorf38Q8TB03 319 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 GOLGA5Q8TBA6 731 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 GIPC2Q8TF65 315 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 ATRIPQ8WXE1 791 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 MRPS31Q92665 395 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 HPS3Q969F9 1004 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 PI4K2AQ9BTU6 479 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 AGPAT3Q9NRZ7 376 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 UXTQ9UBK9 157 aaPredicted RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 USP25Q9UHP3 1055 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
YBX3-218ENST00000546298 MTCL1Q9Y4B5 1905 aaKnown RBP10.05□□□□□ -0.8
YBX3-218ENST00000546298 DOCK8Q8NF50 2099 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 GABRDO14764 452 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 TGFB1I1O43294 461 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms